RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 INO80BQ9C086 356 aaPredicted RBP11.24□□□□□ -0.61
NEK9-205ENST00000555405 CASP8AP2Q9UKL3 1982 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 DENND3A2RUS2 1198 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 RNF149Q8NC42 400 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 PPTC7Q8NI37 304 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 BSNDQ8WZ55 320 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 DRC1Q96MC2 740 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 SEMA6BQ9H3T3 888 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 FANCCQ00597 558 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 SCFD1Q8WVM8 642 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 SUCLA2Q9P2R7 463 aaPredicted RBP11.24□□□□□ -0.61
NEK9-205ENST00000555405 DBR1Q9UK59 544 aaKnown RBP11.24□□□□□ -0.61
NEK9-205ENST00000555405 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
NEK9-205ENST00000555405 HBP1O60381 514 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 ATG7O95352 703 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 CCNE1P24864 410 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 NPTX2P47972 431 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 DNM2P50570 870 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 SLC9C1Q4G0N8 1177 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 SPATA1Q5VX52 437 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 C7orf31Q8N865 590 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
NEK9-205ENST00000555405 FAM212AQ96EL1 285 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 MAF1Q9H063 256 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 RNF208Q9H0X6 261 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
NEK9-205ENST00000555405 N4BP3O15049 544 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 HMGCRP04035 888 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 FGFR4P22455 802 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 LBX1P52954 281 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 ADAM9Q13443 819 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 MTFR1Q15390 333 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEK9-205ENST00000555405 ELOA2Q8IYF1 753 aaPredicted RBP11.23□□□□□ -0.61
NEK9-205ENST00000555405 MCPH1Q8NEM0 835 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 ANKRD20A12PQ8NF67 263 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 ASAP3Q8TDY4 903 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 FAM167AQ96KS9 214 aa11.23□□□□□ -0.61
NEK9-205ENST00000555405 ZNF830Q96NB3 372 aaPredicted RBP11.23□□□□□ -0.61
NEK9-205ENST00000555405 XRCC5P13010 732 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 PLS3P13797 630 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 GAP43P17677 238 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 CPT1AP50416 773 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 MAPK7Q13164 816 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 NCAPHQ15003 741 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 NLRP7Q8WX94 980 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 XPO4Q9C0E2 1151 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 HMX1Q9NP08 348 aaPredicted RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 SEPT4O43236 478 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 STBD1O95210 358 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 CTSHP09668 335 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 NR2F2P24468 414 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 OSTNP61366 133 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 GRIK4Q16099 956 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 KCNA10Q16322 511 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 KIZQ2M2Z5 673 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 SEZ6Q53EL9 994 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 DCAF17Q5H9S7 520 aaPredicted RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 ZBTB33Q86T24 672 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 ENOX1Q8TC92 643 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 PSPC1Q8WXF1 523 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 TRIM44Q96DX7 344 aaPredicted RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 C16orf70Q9BSU1 422 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 ZSWIM8A7E2V4 1837 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 MKI67P46013 3256 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 PLXNB2O15031 1838 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 K7ERI5 159 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 LYPLA2O95372 231 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 CAVIN2O95810 425 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 GUCY2CP25092 1073 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 ERCC5P28715 1186 aaPredicted RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
NEK9-205ENST00000555405 MFSD10Q14728 455 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 STXBP4Q6ZWJ1 553 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 ZNF720Q7Z2F6 126 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 DEFB118Q96PH6 123 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
NEK9-205ENST00000555405 BICDL2A1A5D9 508 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
NEK9-205ENST00000555405 EXOC3O60645 756 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 DUSP11O75319 330 aaKnown RBP11.21□□□□□ -0.61
NEK9-205ENST00000555405 KIF20AO95235 890 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 CYBAP13498 195 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 PSEN2P49810 448 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 PSMD2Q13200 908 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
NEK9-205ENST00000555405 PLPPR4Q7Z2D5 763 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 TMC6Q7Z403 805 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 GUF1Q8N442 669 aaKnown RBP11.21□□□□□ -0.61
NEK9-205ENST00000555405 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
NEK9-205ENST00000555405 SAAL1Q96ER3 474 aa11.21□□□□□ -0.61
NEK9-205ENST00000555405 DHTKD1Q96HY7 919 aaPredicted RBP11.21□□□□□ -0.61
NEK9-205ENST00000555405 NAP1L5Q96NT1 182 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms