RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 EML1O00423 815 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 MGEA5O60502 916 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 JAK2O60674 1132 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 BMP1P13497 986 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 ZSCAN20P17040 1043 aaPredicted RBP13.27□□□□□ -0.29
VRK1-204ENST00000555351 RFC5P40937 340 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 OTUD6AQ7L8S5 288 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 TRMT1LQ7Z2T5 733 aaKnown RBP13.27□□□□□ -0.29
VRK1-204ENST00000555351 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 BANK1Q8NDB2 785 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 SLC7A3Q8WY07 619 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 TRAIPQ9BWF2 469 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 GCOM2Q9BZD3 368 aaPredicted RBP13.27□□□□□ -0.29
VRK1-204ENST00000555351 NSUN3Q9H649 340 aaKnown RBP13.27□□□□□ -0.29
VRK1-204ENST00000555351 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 CYP26B1Q9NR63 512 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 CHST12Q9NRB3 414 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
VRK1-204ENST00000555351 LYPLA2O95372 231 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 CALCRLQ16602 461 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 CSPP1Q1MSJ5 1256 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 NLRP7Q8WX94 980 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 FOXP1Q9H334 677 aaPredicted RBP13.26□□□□□ -0.29
VRK1-204ENST00000555351 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
VRK1-204ENST00000555351 ATP6V0A4Q9HBG4 840 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 DACT1Q9NYF0 836 aa13.26□□□□□ -0.29
VRK1-204ENST00000555351 MRPL42Q9Y6G3 142 aaKnown RBP13.26□□□□□ -0.29
VRK1-204ENST00000555351 A0A0U1RQF3 1178 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 FAM205CA6NFA0 338 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 ASAP2O43150 1006 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 NEMFO60524 1076 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 EOMESO95936 686 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 XRCC6P12956 609 aaKnown RBP eCLIP13.25□□□□□ -0.29
VRK1-204ENST00000555351 SFPQP23246 707 aaKnown RBP eCLIP13.25□□□□□ -0.29
VRK1-204ENST00000555351 TFF2Q03403 129 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 UBE3AQ05086 875 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 RABEP1Q15276 862 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 PUS10Q3MIT2 529 aaKnown RBP13.25□□□□□ -0.29
VRK1-204ENST00000555351 CCDC83Q8IWF9 413 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 FBXO18Q8NFZ0 1043 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 TCP11Q8WWU5 503 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 C8orf76Q96K31 380 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 SCLT1Q96NL6 688 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 HSD17B14Q9BPX1 270 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 LXNQ9BS40 222 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 UBE2ZQ9H832 354 aaPredicted RBP13.25□□□□□ -0.29
VRK1-204ENST00000555351 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
VRK1-204ENST00000555351 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 FNDC1Q4ZHG4 1894 aaPredicted RBP13.25□□□□□ -0.29
VRK1-204ENST00000555351 KIAA1671Q9BY89 1806 aa13.25□□□□□ -0.29
VRK1-204ENST00000555351 REV3LO60673 3130 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 CARNS1A5YM72 827 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 RBAK-RBAKDNI3L0D1 243 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 TNFRSF10AO00220 468 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 SLITRK3O94933 977 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 SKIP12755 728 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 DRP2Q13474 957 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 PCBP1Q15365 356 aaKnown RBP eCLIP13.24□□□□□ -0.29
VRK1-204ENST00000555351 LEXMQ3ZCV2 418 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 NCAPH2Q6IBW4 605 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 PSPC1Q8WXF1 523 aaKnown RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 PPP2R3CQ969Q6 453 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 PABPC5Q96DU9 382 aaKnown RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 CEP170P1Q96L14 293 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 UHRF1Q96T88 793 aaPredicted RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 TTC12Q9H892 705 aaPredicted RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 ANKEF1Q9NU02 776 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 WRAP73Q9P2S5 460 aaPredicted RBP13.24□□□□□ -0.29
VRK1-204ENST00000555351 KIF3AQ9Y496 699 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
VRK1-204ENST00000555351 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 FSD2A1L4K1 749 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 TMEM150BA6NC51 233 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 GRM6O15303 877 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 ST18O60284 1047 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 DTNBO60941 627 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 POLGP54098 1239 aaPredicted RBP13.23□□□□□ -0.29
VRK1-204ENST00000555351 NPEPPSP55786 919 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 PDE12Q6L8Q7 609 aaKnown RBP13.23□□□□□ -0.29
VRK1-204ENST00000555351 SRGAP1Q7Z6B7 1085 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 FAM184AQ8NB25 1140 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 EIF2AK1Q9BQI3 630 aaKnown RBP13.23□□□□□ -0.29
VRK1-204ENST00000555351 RGL1Q9NZL6 768 aa13.23□□□□□ -0.29
VRK1-204ENST00000555351 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms