RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 TNFRSF25Q93038 417 aa14.56□□□□□ -0.08
SIX1-203ENST00000554986 TEX13BQ9BXU2 312 aa14.56□□□□□ -0.08
SIX1-203ENST00000554986 TRIM6Q9C030 488 aaPredicted RBP14.56□□□□□ -0.08
SIX1-203ENST00000554986 DUSP10Q9Y6W6 482 aa14.56□□□□□ -0.08
SIX1-203ENST00000554986 MGAMO43451 1857 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 GRID2IPA4D2P6 1211 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 GPR25O00155 361 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 ZNF263O14978 683 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 MGRN1O60291 552 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 CTGFP29279 349 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 HSPA9P38646 679 aaKnown RBP14.55□□□□□ -0.08
SIX1-203ENST00000554986 SLC7A5Q01650 507 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 ZKSCAN8Q15776 578 aaPredicted RBP14.55□□□□□ -0.08
SIX1-203ENST00000554986 PKN1Q16512 942 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 USH1GQ495M9 461 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 KCTD16Q68DU8 428 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 RNF10Q8N5U6 811 aaKnown RBP14.55□□□□□ -0.08
SIX1-203ENST00000554986 TMBIM4Q9HC24 238 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 PLCB1Q9NQ66 1216 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 BATF3Q9NR55 127 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 CCPG1Q9ULG6 757 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 PLAGL2Q9UPG8 496 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 CAPN6Q9Y6Q1 641 aa14.55□□□□□ -0.08
SIX1-203ENST00000554986 GMNCA6NCL1 334 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 PRPF3O43395 683 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 TRIM21P19474 475 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 CFAP221Q4G0U5 840 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 RIOX2Q8IUF8 465 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 COA7Q96BR5 231 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 CCDC42Q96M95 316 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 BLZF1Q9H2G9 400 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 HOMER2Q9NSB8 354 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 AGPAT5Q9NUQ2 364 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 LRWD1Q9UFC0 647 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 TPX2Q9ULW0 747 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 PCDHA13Q9Y5I0 950 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 DOCK3Q8IZD9 2030 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 TRAPPC3O43617 180 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 ALAS1P13196 640 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 BIRC3Q13489 604 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 ARL6IP4Q66PJ3 421 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 TTI2Q6NXR4 508 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 FAM114A1Q8IWE2 563 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 GPKOWQ92917 476 aaPredicted RBP eCLIP14.54□□□□□ -0.08
SIX1-203ENST00000554986 FAM212AQ96EL1 285 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 DHTKD1Q96HY7 919 aaPredicted RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 IFIH1Q9BYX4 1025 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 OSBPL7Q9BZF2 842 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 ARHGAP39Q9C0H5 1083 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 SEC63Q9UGP8 760 aaKnown RBP14.54□□□□□ -0.08
SIX1-203ENST00000554986 SLC12A6Q9UHW9 1150 aa14.54□□□□□ -0.08
SIX1-203ENST00000554986 E7EVH7 732 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 PSMA7O14818 248 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 COBLO75128 1261 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 PPP1R2P41236 205 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 SEC24CP53992 1094 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 SP3Q02447 781 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 CRELD2Q6UXH1 353 aaPredicted RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 NCAPG2Q86XI2 1143 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 ZNF296Q8WUU4 475 aaPredicted RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 SHISA4Q96DD7 197 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 TUBGCP2Q9BSJ2 902 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 AMNQ9BXJ7 453 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 KDM4CQ9H3R0 1056 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 RBM12Q9NTZ6 932 aaKnown RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 GDAQ9Y2T3 454 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 PLXNB2O15031 1838 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 FAM205CA6NFA0 338 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 LONP1P36776 959 aaKnown RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 CARSP49589 748 aaKnown RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 CLNS1AP54105 237 aaKnown RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 LACTBP83111 547 aaPredicted RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 GRIK3Q13003 919 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 SLMAPQ14BN4 828 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 PPP2R5AQ15172 486 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 PFKFB3Q16875 520 aaPredicted RBP14.53□□□□□ -0.08
SIX1-203ENST00000554986 TYW1BQ6NUM6 668 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 NFRKBQ6P4R8 1299 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 CLEC4DQ8WXI8 215 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 TLR10Q9BXR5 811 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 RNF146Q9NTX7 359 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 PCDHA1Q9Y5I3 950 aa14.53□□□□□ -0.08
SIX1-203ENST00000554986 GOLGA6L10A6NI86 522 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 B4DLN1 442 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 DNM1LO00429 736 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 OPLAHO14841 1288 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 RHOBTB3O94955 611 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 HEXIM1O94992 359 aaKnown RBP14.52□□□□□ -0.09
SIX1-203ENST00000554986 GLI1P08151 1106 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 MYBP10242 640 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 SCG2P13521 617 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 CCNA1P78396 465 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 CYP27A1Q02318 531 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 TBC1D8BQ0IIM8 1120 aa14.52□□□□□ -0.09
SIX1-203ENST00000554986 PTGDRQ13258 359 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms