RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PPARAQ07869 468 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 PPP2R5EQ16537 467 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 IMMTQ16891 758 aaKnown RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 SLC4A8Q2Y0W8 1093 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 C12orf60Q5U649 245 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 STOX1Q6ZVD7 989 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 FAM181AQ8N9Y4 354 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 ZNF526Q8TF50 670 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 KLHL6Q8WZ60 621 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 TMEM39BQ9GZU3 492 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 UPF2Q9HAU5 1272 aaKnown RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 ARPP21Q9UBL0 812 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 SUCOQ9UBS9 1254 aaKnown RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 ZNF214Q9UL59 606 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-212ENST00000554486 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 PLAGL2Q9UPG8 496 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 SNX14Q9Y5W7 946 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 PITPNM2Q9BZ72 1349 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 ATRNL1Q5VV63 1379 aa7.42□□□□□ -1.22
SCFD1-212ENST00000554486 MYH8P13535 1937 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 E7EWF7 191 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 ZNF213O14771 459 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 PAX4O43316 350 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 TAL1P17542 331 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 MCCP23508 829 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 GABPAQ06546 454 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 RASA3Q14644 834 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 ADCK5Q3MIX3 580 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 C22orf34Q6ZV56 151 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 APOBEC3FQ8IUX4 373 aaKnown RBP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 SLC44A5Q8NCS7 719 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 RNF141Q8WVD5 230 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 STAG1Q8WVM7 1258 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 DYNLL2Q96FJ2 89 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 TEPSINQ96N21 525 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 DEFB129Q9H1M3 183 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 PRDM5Q9NQX1 630 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 TPX2Q9ULW0 747 aaKnown RBP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 MAPK8IP1Q9UQF2 711 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCFD1-212ENST00000554486 ROBO3Q96MS0 1386 aa7.41□□□□□ -1.22
SCFD1-212ENST00000554486 TMEM265A0A087WTH1 108 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 ADM5C9JUS6 153 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 SHOXO15266 292 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 HLA-DOAP06340 250 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 ZKSCAN1P17029 563 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-212ENST00000554486 ETV3P41162 512 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 PMS1P54277 932 aaKnown RBP7.4□□□□□ -1.22
SCFD1-212ENST00000554486 ANAPC15P60006 121 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 SERINC3Q13530 473 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 TNFAIP1Q13829 316 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 RAB33AQ14088 237 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 IFI16Q16666 785 aaKnown RBP7.4□□□□□ -1.22
SCFD1-212ENST00000554486 NKPD1Q17RQ9 610 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 AKNAD1Q5T1N1 836 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 PRAMEF18Q5VWM3 479 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 DLK2Q6UY11 383 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 C16orf86Q6ZW13 317 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 PNMA8AQ86V59 439 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-212ENST00000554486 BCL7CQ8WUZ0 217 aaPredicted RBP7.4□□□□□ -1.22
SCFD1-212ENST00000554486 UBXN4Q92575 508 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 DHX36Q9H2U1 1008 aaKnown RBP7.4□□□□□ -1.22
SCFD1-212ENST00000554486 DNAJC18Q9H819 358 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 ACTR10Q9NZ32 417 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 PI4KBQ9UBF8 816 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 VAV3Q9UKW4 847 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 CAPN6Q9Y6Q1 641 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 NEDD4P46934 1319 aa7.4□□□□□ -1.22
SCFD1-212ENST00000554486 SSC5DA1L4H1 1573 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 B2RBV5 119 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 ORC4O43929 436 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 CLEC3AO75596 197 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 CPA1P15085 419 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 SHMT1P34896 483 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 PRKCQQ04759 706 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 KRT32Q14532 448 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 SFRP5Q5T4F7 317 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 TDRD10Q5VZ19 366 aaKnown RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 KRT26Q7Z3Y9 468 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 LDHDQ86WU2 507 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 FOXP4Q8IVH2 680 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 AMOTL1Q8IY63 956 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 MB21D2Q8IYB1 491 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 ABI1Q8IZP0 508 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 PLD6Q8N2A8 252 aaKnown RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 DCPSQ96C86 337 aaKnown RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 JAKMIP1Q96N16 626 aaKnown RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 GLIS2Q9BZE0 524 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-212ENST00000554486 TM6SF1Q9BZW5 370 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 ADGRE2Q9UHX3 823 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 SERPINB13Q9UIV8 391 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 PPP2R3BQ9Y5P8 575 aa7.39□□□□□ -1.23
SCFD1-212ENST00000554486 B4E1Z4 1266 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 PRDM1O75626 825 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 CEACAM5P06731 702 aa7.38□□□□□ -1.23
SCFD1-212ENST00000554486 SLC3A2P08195 630 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms