RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 RCOR1Q9UKL0 485 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TPCN1Q9ULQ1 816 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 TPX2Q9ULW0 747 aaKnown RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 FZD1Q9UP38 647 aa6.75□□□□□ -1.33
VPS33B-203ENST00000554264 MORC2Q9Y6X9 1032 aaPredicted RBP6.75□□□□□ -1.33
VPS33B-203ENST00000554264 LAMA4Q16363 1823 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 WTIPA6NIX2 430 aaPredicted RBP6.74□□□□□ -1.33
VPS33B-203ENST00000554264 H0YGN5 161 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 PFKFB2O60825 505 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 CEACAM5P06731 702 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 PTGS1P23219 599 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 CD96P40200 585 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 GJA8P48165 433 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 YARSP54577 528 aaKnown RBP6.74□□□□□ -1.33
VPS33B-203ENST00000554264 PTH1RQ03431 593 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 NCBP1Q09161 790 aaKnown RBP6.74□□□□□ -1.33
VPS33B-203ENST00000554264 RESTQ13127 1097 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 NMIQ13287 307 aaPredicted RBP6.74□□□□□ -1.33
VPS33B-203ENST00000554264 KIF22Q14807 665 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 ARSHQ5FYA8 562 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 OVOS1Q6IE37 1185 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 SPRED2Q7Z698 418 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 LRRC8AQ8IWT6 810 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 KCNG4Q8TDN1 519 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 CYB5D2Q8WUJ1 264 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 ATG4CQ96DT6 458 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 NEK1Q96PY6 1258 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 GREM2Q9H772 168 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 GPR108Q9NPR9 543 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 HELLSQ9NRZ9 838 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 CTNNA3Q9UI47 895 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 PYCARDQ9ULZ3 195 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 PPT2Q9UMR5 302 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 MAPK8IP1Q9UQF2 711 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 PTCH2Q9Y6C5 1203 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 WDR19Q8NEZ3 1342 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 SSC5DA1L4H1 1573 aa6.74□□□□□ -1.33
VPS33B-203ENST00000554264 LAMB1P07942 1786 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CBFA2T2O43439 604 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 LRRN2O75325 713 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 USP2O75604 605 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 UBOX5O94941 541 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 SLU7O95391 586 aaKnown RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 LARGE1O95461 756 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 YEATS4O95619 227 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CBX7O95931 251 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF865P0CJ78 1059 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 POLR2BP30876 1174 aaKnown RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 GTF2A2P52657 109 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 PRMT2P55345 433 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 FKBP1AP62942 108 aaKnown RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 TNFAIP1Q13829 316 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 BMS1Q14692 1282 aaKnown RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 ADCK5Q3MIX3 580 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CFAP100Q494V2 611 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 MCMDC2Q4G0Z9 681 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 XP32Q5T750 250 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF574Q6ZN55 896 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 BRAPQ7Z569 592 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 LUZP1Q86V48 1076 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 SPC24Q8NBT2 197 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 RASGRP4Q8TDF6 673 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 BCL7CQ8WUZ0 217 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 VWCEQ96DN2 955 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF274Q96GC6 653 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 Q96M66 194 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF830Q96NB3 372 aaPredicted RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 MPHOSPH8Q99549 860 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 PTPN18Q99952 460 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 DSCC1Q9BVC3 393 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 AGXT2Q9BYV1 514 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 IL25Q9H293 177 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 VEZTQ9HBM0 779 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CD209Q9NNX6 404 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 GMIPQ9P107 970 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 MAP3K2Q9Y2U5 619 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CAPN6Q9Y6Q1 641 aa6.73□□□□□ -1.33
VPS33B-203ENST00000554264 KIAA0100Q14667 2235 aaKnown RBP6.73□□□□□ -1.33
VPS33B-203ENST00000554264 CLRN2A0PK11 232 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 IKBKBO14920 756 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 TAF5LO75529 589 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 SKILP12757 684 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 ERCC5P28715 1186 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 EVCP57679 992 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 CAP1Q01518 475 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 ST3GAL1Q11201 340 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 TOB2Q14106 344 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 RASA3Q14644 834 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 IQCB1Q15051 598 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 IFI16Q16666 785 aaKnown RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 NBPF12Q5TAG4 269 aaPredicted RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 ADALQ6DHV7 355 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 C15orf52Q6ZUT6 534 aaKnown RBP6.72□□□□□ -1.33
VPS33B-203ENST00000554264 C22orf34Q6ZV56 151 aa6.72□□□□□ -1.33
VPS33B-203ENST00000554264 ZNF804AQ7Z570 1209 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms