RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 PCDHB13Q9Y5F0 798 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 WDR81Q562E7 1941 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 K7ENM7 598 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 HAS3O00219 553 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PDXKO00764 312 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 ADAMTS4O75173 837 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PPP1R37O75864 691 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 GCNT3O95395 438 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 C22orf31O95567 290 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 INHAP05111 366 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 C6orf222P0C671 652 aaPredicted RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 INSRRP14616 1297 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 CNGA1P29973 690 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 CCND3P30281 292 aaPredicted RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 ARL2P36404 184 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 NAMPTP43490 491 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 SNRPFP62306 86 aaKnown RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 GTF2BQ00403 316 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PURAQ00577 322 aaKnown RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 TRIM32Q13049 653 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PPFIA1Q13136 1202 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 MXD4Q14582 209 aaPredicted RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 EDRF1Q3B7T1 1238 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 ZCWPW2Q504Y3 356 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 IER5Q5VY09 327 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 TTI2Q6NXR4 508 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 SARM1Q6SZW1 724 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PCSK9Q8NBP7 692 aaKnown RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 RETREG2Q8NC44 543 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 GOLGA5Q8TBA6 731 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 ANP32BQ92688 251 aaKnown RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 KAT2BQ92831 832 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 HPS3Q969F9 1004 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 IFT74Q96LB3 600 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 MED15Q96RN5 788 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 TSG101Q99816 390 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 STRA6Q9BX79 667 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 POLR3FQ9H1D9 316 aaPredicted RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 RNPEPQ9H4A4 650 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 GPRC5CQ9NQ84 441 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 XPNPEP3Q9NQH7 507 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 CGNQ9P2M7 1197 aaKnown RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 DDX20Q9UHI6 824 aaKnown RBP8.44□□□□□ -1.06
TDP1-209ENST00000554180 TRAF3IP3Q9Y228 551 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PTCH2Q9Y6C5 1203 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 ARID2Q68CP9 1835 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 PHLPP2Q6ZVD8 1323 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 NRCAMQ92823 1304 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 HTTP42858 3142 aa8.44□□□□□ -1.06
TDP1-209ENST00000554180 CEP350Q5VT06 3117 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 MBLAC1A4D2B0 266 aaPredicted RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 CABYRO75952 493 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 FGFR1OPO95684 399 aaKnown RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 MYL3P08590 195 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 ZNF18P17022 549 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 TMOD1P28289 359 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 HOXC8P31273 242 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 NPTX2P47972 431 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 PSEN2P49810 448 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 DNM2P50570 870 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 CASP5P51878 434 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 PEX3P56589 373 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 STX17P56962 302 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 BEX3Q00994 111 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 SPAG1Q07617 926 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 MFSD10Q14728 455 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 GRIK4Q16099 956 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 NFIL3Q16649 462 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 TPD52L1Q16890 204 aaPredicted RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 KNOP1Q1ED39 458 aaKnown RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 KIAA0753Q2KHM9 967 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 CDKAL1Q5VV42 579 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 HAUS6Q7Z4H7 955 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 FAM114A1Q8IWE2 563 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 ZC3H3Q8IXZ2 948 aaKnown RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 ZNF710Q8N1W2 664 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 TMEM161BQ8NDZ6 487 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 GLIS3Q8NEA6 775 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 KLHDC9Q8NEP7 349 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 TMEM174Q8WUU8 243 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 PSPC1Q8WXF1 523 aaKnown RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 MTG1Q9BT17 334 aaPredicted RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 FGFBP2Q9BYJ0 223 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 HSD3B7Q9H2F3 369 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 KCTD10Q9H3F6 313 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 THAP9Q9H5L6 903 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 TMEM206Q9H813 350 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 HMX1Q9NP08 348 aaPredicted RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 TYW1Q9NV66 732 aaKnown RBP8.43□□□□□ -1.06
TDP1-209ENST00000554180 TBC1D7Q9P0N9 293 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 ARHGAP28Q9P2N2 729 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 EXOC7Q9UPT5 735 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 MAPK8IP1Q9UQF2 711 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 PTPN22Q9Y2R2 807 aa8.43□□□□□ -1.06
TDP1-209ENST00000554180 ASAP2O43150 1006 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms