RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 MGAMO43451 1857 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 CCDC169A6NNP5 214 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 PPP1R3GB7ZBB8 358 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 IKBKBO14920 756 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 ASAP2O43150 1006 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 GCNT3O95395 438 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 FGFR1OPO95684 399 aaKnown RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 PGK1P00558 417 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 F2P00734 622 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 INSRRP14616 1297 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 CTCFP49711 727 aaPredicted RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 PSEN2P49810 448 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 PEX3P56589 373 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 IGBP1P78318 339 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 NKX3-2P78367 333 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 EHHADHQ08426 723 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 MXD4Q14582 209 aaPredicted RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 MFSD10Q14728 455 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 SMYD4Q8IYR2 804 aaPredicted RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 AOPEPQ8N6M6 819 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 ARRDC4Q8NCT1 418 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 ENOX1Q8TC92 643 aaKnown RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 NELFBQ8WX92 580 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 LENG1Q96BZ8 264 aaPredicted RBP11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 SUGCTQ9HAC7 445 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 GRPEL1Q9HAV7 217 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 RWDD2AQ9UIY3 292 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 MAPK8IP1Q9UQF2 711 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 SYNRGQ9UMZ2 1314 aa11.55□□□□□ -0.56
TMEM55B-205ENST00000554028 EIF3DO15371 548 aaKnown RBP eCLIP11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 CABYRO75952 493 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 CCNE1P24864 410 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 KLRC1P26715 233 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 TFDP1Q14186 410 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 GRIK4Q16099 956 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 SPATA1Q5VX52 437 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 ZNF720Q7Z2F6 126 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 CTU1Q7Z7A3 348 aaKnown RBP11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 LUZP1Q86V48 1076 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 METTL13Q8N6R0 699 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 DEPTORQ8TB45 409 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 PSPC1Q8WXF1 523 aaKnown RBP11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 P2RX5Q93086 422 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 HPS3Q969F9 1004 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 POLD4Q9HCU8 107 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 KMT5AQ9NQR1 393 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 EXOC7Q9UPT5 735 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 CTNND2Q9UQB3 1225 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 UBE4BO95155 1302 aa11.54□□□□□ -0.56
TMEM55B-205ENST00000554028 FSD2A1L4K1 749 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 K7ENM7 598 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 ADAMTS4O75173 837 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 SMIM10L2AP0DMW4 78 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 SMIM10L2BP0DMW5 78 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 CDK11BP21127 795 aaKnown RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 NAMPTP43490 491 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 STX17P56962 302 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 PURAQ00577 322 aaKnown RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 CDC42EP1Q00587 391 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 LRRC63Q05C16 580 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 MAPK7Q13164 816 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 IQCB1Q15051 598 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 LRRC41Q15345 812 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 KCNA10Q16322 511 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 DAW1Q8N136 415 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 KIAA0895Q8NCT3 520 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 ANKRD20A12PQ8NF67 263 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 GOLGA5Q8TBA6 731 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 SH3TC2Q8TF17 1288 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 ACCSQ96QU6 501 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 NTPCRQ9BSD7 190 aaKnown RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 TSEN34Q9BSV6 310 aaKnown RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 TMEM206Q9H813 350 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 GPRC5CQ9NQ84 441 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 SUCLA2Q9P2R7 463 aaPredicted RBP11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 PCDHA2Q9Y5H9 948 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 MCM3APO60318 1980 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 PHLPP2Q6ZVD8 1323 aa11.53□□□□□ -0.56
TMEM55B-205ENST00000554028 IGKV6-21A0A0C4DH24 114 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 C17orf102A2RUQ5 167 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms