RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 REC8O95072 547 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 EYA4O95677 639 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 SFNP31947 248 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 DNM2P50570 870 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 CAMK1Q14012 370 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 EDAQ92838 391 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 PBXIP1Q96AQ6 731 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 MSLNLQ96KJ4 702 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 PHF7Q9BWX1 381 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 MRPL9Q9BYD2 267 aaKnown RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 DACT1Q9NYF0 836 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 CLEC1BQ9P126 229 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 VPS54Q9P1Q0 977 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-210ENST00000553779 ZBTB42B2RXF5 422 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 GLP2RO95838 553 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 SFPQP23246 707 aaKnown RBP eCLIP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 ERVFC1P60507 584 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 NHLH1Q02575 133 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 DUSP6Q16828 381 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 MTERF2Q49AM1 385 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 CES5AQ6NT32 575 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 KCNT2Q6UVM3 1135 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 C22orf23Q9BZE7 217 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-210ENST00000553779 SPG21Q9NZD8 308 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 C2orf16Q68DN1 1984 aa11.16□□□□□ -0.62
ACTN1-210ENST00000553779 MSH4O15457 936 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 MARCH6O60337 910 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 GPR32O75388 356 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 ATP4AP20648 1035 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 EIF4BP23588 611 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 PBX3P40426 434 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 ALDH7A1P49419 539 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 MRE11P49959 708 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 RBM10P98175 930 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 RNASELQ05823 741 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 PKN1Q16512 942 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 TWF2Q6IBS0 349 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 ECHDC2Q86YB7 292 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 HELQQ8TDG4 1101 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 CASP10Q92851 521 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 TMEM169Q96HH4 297 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 RIT2Q99578 217 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 SLKQ9H2G2 1235 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 CWH43Q9H720 699 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
ACTN1-210ENST00000553779 NR2E1Q9Y466 385 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
ACTN1-210ENST00000553779 NID2Q14112 1375 aa11.15□□□□□ -0.63
ACTN1-210ENST00000553779 PTPRZ1P23471 2315 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-210ENST00000553779 LOC730098B7Z3J9 87 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.63
ACTN1-210ENST00000553779 DARSP14868 501 aaKnown RBP11.14□□□□□ -0.63
ACTN1-210ENST00000553779 ATF7P17544 494 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-210ENST00000553779 FGFR4P22455 802 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 CIITAP33076 1130 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 GPC3P51654 580 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 PTPN5P54829 565 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 ZXDAP98168 799 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 ANKRD54Q6NXT1 300 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 PRRX2Q99811 253 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 UNC45AQ9H3U1 944 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 SH3GLB2Q9NR46 395 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 PIN4Q9Y237 131 aaKnown RBP11.14□□□□□ -0.63
ACTN1-210ENST00000553779 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
ACTN1-210ENST00000553779 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 RIF1Q5UIP0 2472 aaKnown RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 SPTBN4Q9H254 2564 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-210ENST00000553779 DDX11L8A8MPP1 907 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 FSCN2O14926 492 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 SKIP12755 728 aa11.13□□□□□ -0.63
ACTN1-210ENST00000553779 IFNAR1P17181 557 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms