RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 ZNF668Q96K58 619 aaPredicted RBP13.23□□□□□ -0.29
TMEM253-202ENST00000553744 SCLT1Q96NL6 688 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 COL25A1Q9BXS0 654 aaPredicted RBP13.23□□□□□ -0.29
TMEM253-202ENST00000553744 PBX4Q9BYU1 374 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 DDX19AQ9NUU7 478 aaKnown RBP13.23□□□□□ -0.29
TMEM253-202ENST00000553744 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 STXBP5LQ9Y2K9 1186 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 NOC2LQ9Y3T9 749 aaKnown RBP13.23□□□□□ -0.29
TMEM253-202ENST00000553744 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 MORC2Q9Y6X9 1032 aaPredicted RBP13.23□□□□□ -0.29
TMEM253-202ENST00000553744 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
TMEM253-202ENST00000553744 MICAL3Q7RTP6 2002 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 ARHGEF35A5YM69 484 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 AMHP03971 560 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 DARSP14868 501 aaKnown RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 EIF4BP23588 611 aaKnown RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 DNAJB2P25686 324 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 PBX2P40425 430 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 CEBPZQ03701 1054 aaKnown RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 GRIN1Q05586 938 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 RAB30Q15771 203 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 ODR4Q5SWX8 454 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 HERC6Q8IVU3 1022 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 DEFB123Q8N688 67 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 NLRP4Q96MN2 994 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 ZNF396Q96N95 335 aaPredicted RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 FTHL17Q9BXU8 183 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 ERVK-5Q9HDB9 667 aa13.22□□□□□ -0.29
TMEM253-202ENST00000553744 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 LAMA2P24043 3122 aaKnown RBP13.22□□□□□ -0.29
TMEM253-202ENST00000553744 PTPRSQ13332 1948 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 A0A087WZ62 844 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 GPR182O15218 404 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 SLC26A4O43511 780 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 BRD1O95696 1058 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 MARCKSP29966 332 aaPredicted RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 RABGGTBP53611 331 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 LAMTOR4Q0VGL1 99 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 NFX1Q12986 1120 aaKnown RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 SLC39A14Q15043 492 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 FAM43BQ6ZT52 329 aaPredicted RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 CABP7Q86V35 215 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 KSR1Q8IVT5 923 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 MYOCDQ8IZQ8 938 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 KCTD17Q8N5Z5 321 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 MCPH1Q8NEM0 835 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 LINC01599Q8WXQ3 324 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 FDXACB1Q9BRP7 624 aaPredicted RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 BHMT2Q9H2M3 363 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 TMX1Q9H3N1 280 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 MTMR10Q9NXD2 777 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 ST3GAL5Q9UNP4 418 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 DNM3Q9UQ16 869 aa13.21□□□□□ -0.29
TMEM253-202ENST00000553744 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
TMEM253-202ENST00000553744 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 E9PMD0 336 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 ASAP2O43150 1006 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 GJB5O95377 273 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 EYA4O95677 639 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 UBA7P41226 1012 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 GRB10Q13322 594 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 MXD4Q14582 209 aaPredicted RBP13.2□□□□□ -0.3
TMEM253-202ENST00000553744 ZRSR1Q15695 479 aaKnown RBP13.2□□□□□ -0.3
TMEM253-202ENST00000553744 TMEM119Q4V9L6 283 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 Q7L0L9 218 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 KCNK18Q7Z418 384 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 TMCO2Q7Z6W1 182 aaPredicted RBP13.2□□□□□ -0.3
TMEM253-202ENST00000553744 LINC00301Q8NCQ3 95 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 TIFAQ96CG3 184 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
TMEM253-202ENST00000553744 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
TMEM253-202ENST00000553744 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 MSRAQ9UJ68 235 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
TMEM253-202ENST00000553744 PCDHA11Q9Y5I1 949 aa13.2□□□□□ -0.3
TMEM253-202ENST00000553744 SPTBN5Q9NRC6 3674 aaKnown RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 ENPP3O14638 875 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 TLL1O43897 1013 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 MGEA5O60502 916 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 YEATS4O95619 227 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 CYP11B2P19099 503 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 SFPQP23246 707 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM253-202ENST00000553744 ARL2P36404 184 aa13.19□□□□□ -0.3
TMEM253-202ENST00000553744 STK38Q15208 465 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms