RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 UBR2Q8IWV8 1755 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 A0A1W2PQ27 194 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 A0A1W2PQ64 194 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 A0A1W2PQC6 194 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 A0A1W2PQD8 194 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 OR14I1A6ND48 311 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 ADCY3O60266 1144 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 FGRP09769 529 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 SDHBP21912 280 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 RAP1GAPP47736 663 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 MCF2L2Q86YR7 1114 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 ZBED3Q96IU2 234 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-223ENST00000553686 PTCHD1Q96NR3 888 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-223ENST00000553686 MCMBPQ9BTE3 642 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 COA1Q9GZY4 146 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 CGGBP1Q9UFW8 167 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-223ENST00000553686 ACSL6Q9UKU0 697 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
ATXN3-223ENST00000553686 ZNF804BA4D1E1 1349 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 XDHP47989 1333 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 ADGRA2Q96PE1 1338 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 DBX1A6NMT0 343 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 NFIBO00712 420 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 AURKAO14965 403 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 ARL4AP40617 200 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 CYP4F8P98187 520 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 AMPD2Q01433 879 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 PRKCZQ05513 592 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 LAPTM5Q13571 262 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 LARP1BQ659C4 914 aaKnown RBP7.56□□□□□ -1.2
ATXN3-223ENST00000553686 TTLL5Q6EMB2 1281 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-223ENST00000553686 NUP43Q8NFH3 380 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 ATXN2LQ8WWM7 1075 aaKnown RBP7.56□□□□□ -1.2
ATXN3-223ENST00000553686 PHACTR3Q96KR7 559 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 C11orf49Q9H6J7 331 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 MIS18AQ9NYP9 233 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 IMPACTQ9P2X3 320 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 APEX2Q9UBZ4 518 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 CPA4Q9UI42 421 aa7.56□□□□□ -1.2
ATXN3-223ENST00000553686 MYOCOSA0A1B0GUC4 107 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 ETV2O00321 342 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-223ENST00000553686 NAT2P11245 290 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 PRKAR2BP31323 418 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 EIF4A1P60842 406 aaKnown RBP7.55□□□□□ -1.2
ATXN3-223ENST00000553686 TNFAIP1Q13829 316 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 RASA3Q14644 834 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 C6orf15Q6UXA7 325 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-223ENST00000553686 CYP2R1Q6VVX0 501 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 COPS6Q7L5N1 327 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 FAM178BQ8IXR5 827 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 PPP1R14AQ96A00 147 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 FAM89AQ96GI7 184 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 P2RX7Q99572 595 aaKnown RBP7.55□□□□□ -1.2
ATXN3-223ENST00000553686 MXD3Q9BW11 206 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 VEZTQ9HBM0 779 aa7.55□□□□□ -1.2
ATXN3-223ENST00000553686 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 C2orf71A6NGG8 1288 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 STXBP3O00186 592 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
ATXN3-223ENST00000553686 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-223ENST00000553686 PEX10O60683 326 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 DDAH1O94760 285 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 TSPAN15O95858 294 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 KRT1P04264 644 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 CTGFP29279 349 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 ZNF143P52747 638 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-223ENST00000553686 MVKQ03426 396 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 GRB10Q13322 594 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 DCTN1Q14203 1278 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 FXNQ16595 210 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 ERO1BQ86YB8 467 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 BVESQ8NE79 360 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 DIS3LQ8TF46 1054 aaKnown RBP7.54□□□□□ -1.2
ATXN3-223ENST00000553686 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-223ENST00000553686 EMC9Q9Y3B6 208 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
ATXN3-223ENST00000553686 CACNA1AO00555 2505 aa7.54□□□□□ -1.2
ATXN3-223ENST00000553686 CLRN2A0PK11 232 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 KCNH1O95259 989 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 MPOP05164 745 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
ATXN3-223ENST00000553686 FLT3LGP49771 235 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 SEPHS1P49903 392 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 ERVFRD-1P60508 538 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 MRPS5P82675 430 aaKnown RBP7.53□□□□□ -1.2
ATXN3-223ENST00000553686 SMAD3P84022 425 aaKnown RBP7.53□□□□□ -1.2
ATXN3-223ENST00000553686 AIMP1Q12904 312 aaKnown RBP7.53□□□□□ -1.2
ATXN3-223ENST00000553686 FZD5Q13467 585 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 VGLL4Q14135 290 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 CCDC152Q4G0S7 254 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 RCSD1Q6JBY9 416 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 ATG14Q6ZNE5 492 aa7.53□□□□□ -1.2
ATXN3-223ENST00000553686 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms