RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 GGPS1O95749 300 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 GSTA1P08263 222 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 H2AFZP0C0S5 128 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM153BP0C7A2 387 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 TMEM253P0C7T8 217 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 XRCC5P13010 732 aaKnown RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 NR2F2P24468 414 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PON1P27169 355 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 HOXA10P31260 410 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 HNRNPH1P31943 449 aaKnown RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 HSD17B3P37058 310 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 LIG3P49916 1009 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 GSCP56915 257 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 MCCD1P59942 119 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PTENP60484 403 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 POU5F1Q01860 360 aaKnown RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PTK2Q05397 1052 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ZNF844Q08AG5 666 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 IFFO1Q0D2I5 559 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 KCNH2Q12809 1159 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 TRAF1Q13077 416 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ADAM9Q13443 819 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PPP2R5AQ15172 486 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 UAP1Q16222 522 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM153CQ494X1 144 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 CEP85LQ5SZL2 805 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 C11orf63Q6NUN7 778 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ALKBH5Q6P6C2 394 aaKnown RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 BICDL1Q6ZP65 573 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 H2AFVQ71UI9 128 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 NT5DC3Q86UY8 548 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ADGRF4Q8IZF3 695 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 METTL13Q8N6R0 699 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM133AQ8N9E0 248 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 SLC30A5Q8TAD4 765 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 OLIG1Q8TAK6 271 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ETNPPLQ8TBG4 499 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 DCAF4Q8WV16 495 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 SLC35C1Q96A29 364 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 TLCD1Q96CP7 247 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 CYFIP2Q96F07 1278 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PGM2Q96G03 612 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 EEF2KMTQ96G04 330 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ACSBG1Q96GR2 724 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 LRCH3Q96II8 777 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 MS4A14Q96JA4 679 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 SPAG5Q96R06 1193 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 CCT8L2Q96SF2 557 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 KRT12Q99456 494 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 NUDT12Q9BQG2 462 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 POLR3CQ9BUI4 534 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PRR14Q9BWN1 585 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 CCDC134Q9H6E4 229 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PSTPIP2Q9H939 334 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 HMX1Q9NP08 348 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 SIX2Q9NPC8 291 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 NLRC4Q9NPP4 1024 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 EHD2Q9NZN4 543 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 KCND2Q9NZV8 630 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ANKIB1Q9P2G1 1089 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ADAMTS1Q9UHI8 967 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 FAM153AQ9UHL3 310 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 SERPINB13Q9UIV8 391 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 GGA1Q9UJY5 639 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 PLAAQ9Y263 795 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 RTCBQ9Y3I0 505 aaKnown RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 NOC2LQ9Y3T9 749 aaKnown RBP5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 LOXHD1Q8IVV2 1947 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 ASTN1O14525 1302 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 SYNGAP1Q96PV0 1343 aa5.72□□□□□ -1.49
TMEM55B-204ENST00000553602 GOLGA6L10A0A0M3HER8 536 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 KLRG2A4D1S0 409 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 GMNCA6NCL1 334 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 ZSCAN5CA6NGD5 496 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 POM121CA8CG34 1229 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 VGLL3A8MV65 326 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 F8VZ95 297 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MYO1FO00160 1098 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PIK3CDO00329 1044 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 KCNK3O14649 394 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 CHUKO15111 745 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PMM2O15305 246 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 C21orf2O43822 256 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 RASSF9O75901 435 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 BBOX1O75936 387 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 DNAJC8O75937 253 aaPredicted RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MTA2O94776 668 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 EYA4O95677 639 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 CYP3A4P08684 503 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 HMGB2P26583 209 aaKnown RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 CTNNA1P35221 906 aaKnown RBP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 SREBF1P36956 1147 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 STAT1P42224 750 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 MATR3P43243 847 aaKnown RBP eCLIP5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PPP2R2AP63151 447 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 GUCY1A3Q02108 690 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 PPATQ06203 517 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 IRF5Q13568 498 aa5.71□□□□□ -1.5
TMEM55B-204ENST00000553602 BYSLQ13895 437 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms