RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 VPS53Q5VIR6 699 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 NAA16Q6N069 864 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 RUFY4Q6ZNE9 571 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 COPS6Q7L5N1 327 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 NLRP8Q86W28 1048 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 XAGE3Q8WTP9 111 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 DDX17Q92841 729 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 OSBPL9Q96SU4 736 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 BARD1Q99728 777 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 DSCC1Q9BVC3 393 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 CAPS2Q9BXY5 557 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 EHMT1Q9H9B1 1298 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 ARFGAP3Q9NP61 516 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 SLC5A4Q9NY91 659 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 GOLGA6L9A6NEM1 432 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 KHNYNO15037 678 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 PFDN1O60925 122 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 VSIG8P0DPA2 414 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 ALOX15P16050 662 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 TUFMP49411 452 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 MRPL12P52815 198 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 RCAN1P53805 252 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 POLR2FP61218 127 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 NSUN2Q08J23 767 aaKnown RBP eCLIP4.41□□□□□ -1.7
RDH11-204ENST00000553578 SF3B3Q15393 1217 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 LRRC69Q6ZNQ3 347 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 CCDC73Q6ZRK6 1079 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 MFN1Q8IWA4 741 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PLD6Q8N2A8 252 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 CEP112Q8N8E3 955 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PPHLN1Q8NEY8 458 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 ENOX1Q8TC92 643 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 VMP1Q96GC9 406 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 LGR4Q9BXB1 951 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 OSBPL10Q9BXB5 764 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 SLC26A6Q9BXS9 759 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 RABEP2Q9H5N1 569 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 A1CFQ9NQ94 594 aaKnown RBP4.41□□□□□ -1.7
RDH11-204ENST00000553578 PRDM11Q9NQV5 511 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 PCDHGC4Q9Y5F7 938 aa4.41□□□□□ -1.7
RDH11-204ENST00000553578 SPDYE3A6NKU9 549 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 EIF3FO00303 357 aaPredicted RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 EML1O00423 815 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 MEIS1O00470 390 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 ATXN7O15265 892 aaPredicted RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 RTN2O75298 545 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 CAMTA2O94983 1202 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 TXLNAP40222 546 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 AIMP1Q12904 312 aaKnown RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 TMED1Q13445 227 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 MRPL58Q14197 206 aaKnown RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 PARP10Q53GL7 1025 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 TNNI3KQ59H18 835 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 SH3PXD2AQ5TCZ1 1133 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 TRIM68Q6AZZ1 485 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 REXO1L1PQ8IX06 675 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 LILRB2Q8N423 598 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 SMARCC1Q92922 1105 aaPredicted RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 EAF2Q96CJ1 260 aaPredicted RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 SH3GL1Q99961 368 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 CRISPLD1Q9H336 500 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 PAPOLBQ9NRJ5 636 aaKnown RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 ZBTB21Q9ULJ3 1066 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 GPC6Q9Y625 555 aaPredicted RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 BZW2Q9Y6E2 419 aaKnown RBP4.4□□□□□ -1.7
RDH11-204ENST00000553578 FPGT-TNNI3KV9GXZ4 949 aa4.4□□□□□ -1.7
RDH11-204ENST00000553578 GOLGA6L10A0A0M3HER8 536 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 FOXP2O15409 715 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 AP1G1O43747 822 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 SRGAP2CP0DJJ0 459 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 MYBL1P10243 752 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 GNAT1P11488 350 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 GFOD2Q3B7J2 385 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 NLRP10Q86W26 655 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 PEX5LQ8IYB4 626 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 CNTROBQ8N137 903 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 NKAIN3Q8N8D7 197 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 CCDC150Q8NCX0 1101 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 GOLGA1Q92805 767 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 SKA1Q96BD8 255 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 RBCK1Q9BYM8 510 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 TRIM5Q9C035 493 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 MIR1-1HGQ9H1L0 117 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 IL25Q9H293 177 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 TRHDEQ9UKU6 1024 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 INVSQ9Y283 1065 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 FAM169AQ9Y6X4 670 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 LOC285556D6RIA3 1793 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 ALG1L2C9J202 215 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 BOLA2-SMG1P6H3BVE0 249 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 MYO1FO00160 1098 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 SRGAP3O43295 1099 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 PF4P02776 101 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 HOXA10P31260 410 aaPredicted RBP4.4□□□□□ -1.71
RDH11-204ENST00000553578 HALP42357 657 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 CCT5P48643 541 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 SEPT2Q15019 361 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 SEPT7Q16181 437 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms