RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 DGAT1O75907 488 aa25.41■■□□□ 1.66
TDP1-206ENST00000553569 XRCC6P12956 609 aaKnown RBP eCLIP25.41■■□□□ 1.66
TDP1-206ENST00000553569 MARCKSP29966 332 aaPredicted RBP25.41■■□□□ 1.66
TDP1-206ENST00000553569 GRIN1Q05586 938 aa25.41■■□□□ 1.66
TDP1-206ENST00000553569 KSR1Q8IVT5 923 aa25.41■■□□□ 1.66
TDP1-206ENST00000553569 PSPC1Q8WXF1 523 aaKnown RBP25.41■■□□□ 1.66
TDP1-206ENST00000553569 PBX4Q9BYU1 374 aa25.41■■□□□ 1.66
TDP1-206ENST00000553569 AMHP03971 560 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 DNAJB2P25686 324 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 FAM228AQ86W67 206 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 HERC6Q8IVU3 1022 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 MYOCDQ8IZQ8 938 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 ZNF710Q8N1W2 664 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 PHOSPHO2Q8TCD6 241 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 TCP11Q8WWU5 503 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 ERVK-5Q9HDB9 667 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 COL4A3BPQ9Y5P4 624 aa25.4■■□□□ 1.66
TDP1-206ENST00000553569 A0A087WZ62 844 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 FAM117BQ6P1L5 589 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 MAEAQ7L5Y9 396 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 CABP7Q86V35 215 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 PRPF31Q8WWY3 499 aaKnown RBP25.39■■□□□ 1.66
TDP1-206ENST00000553569 CDK5RAP3Q96JB5 506 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 AK8Q96MA6 479 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 ZNF396Q96N95 335 aaPredicted RBP25.39■■□□□ 1.66
TDP1-206ENST00000553569 PLIN2Q99541 437 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 FDXACB1Q9BRP7 624 aaPredicted RBP25.39■■□□□ 1.66
TDP1-206ENST00000553569 BHMT2Q9H2M3 363 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 ST3GAL5Q9UNP4 418 aa25.39■■□□□ 1.66
TDP1-206ENST00000553569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 E9PMD0 336 aa25.38■■□□□ 1.65
TDP1-206ENST00000553569 DARSP14868 501 aaKnown RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 EIF4BP23588 611 aaKnown RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 LONP1P36776 959 aaKnown RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 RAB30Q15771 203 aa25.38■■□□□ 1.65
TDP1-206ENST00000553569 LINC01599Q8WXQ3 324 aa25.38■■□□□ 1.65
TDP1-206ENST00000553569 GCOM2Q9BZD3 368 aaPredicted RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 TMX1Q9H3N1 280 aa25.38■■□□□ 1.65
TDP1-206ENST00000553569 TFIP11Q9UBB9 837 aaKnown RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 DAXXQ9UER7 740 aaPredicted RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 MSRAQ9UJ68 235 aa25.38■■□□□ 1.65
TDP1-206ENST00000553569 FBXO2Q9UK22 296 aaPredicted RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 YBX2Q9Y2T7 364 aaKnown RBP25.38■■□□□ 1.65
TDP1-206ENST00000553569 GPR182O15218 404 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 CSDE1O75534 798 aaKnown RBP25.37■■□□□ 1.65
TDP1-206ENST00000553569 MYOGP15173 224 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 FGFR4P22455 802 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 CDC42EP1Q00587 391 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 LAMTOR4Q0VGL1 99 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 STK38Q15208 465 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 ODR4Q5SWX8 454 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 PADI6Q6TGC4 694 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 ZNF410Q86VK4 478 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 TIFAQ96CG3 184 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 PNMA5Q96PV4 448 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 ZBED2Q9BTP6 218 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 FTHL17Q9BXU8 183 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 POLR3FQ9H1D9 316 aaPredicted RBP25.37■■□□□ 1.65
TDP1-206ENST00000553569 DNM3Q9UQ16 869 aa25.37■■□□□ 1.65
TDP1-206ENST00000553569 UPP2O95045 317 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 SRGAP2CP0DJJ0 459 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 IBSPP21815 317 aaPredicted RBP25.36■■□□□ 1.65
TDP1-206ENST00000553569 UBA7P41226 1012 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 NASPP49321 788 aaPredicted RBP25.36■■□□□ 1.65
TDP1-206ENST00000553569 GRB10Q13322 594 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 KCNK18Q7Z418 384 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 RASSF8Q8NHQ8 419 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 ASAP3Q8TDY4 903 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 CSRNP2Q9H175 543 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 NKX2-4Q9H2Z4 354 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 GPRC5CQ9NQ84 441 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 PCDHA11Q9Y5I1 949 aa25.36■■□□□ 1.65
TDP1-206ENST00000553569 ENPP3O14638 875 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 TLL1O43897 1013 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 EYA4O95677 639 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 SLC39A14Q15043 492 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 SPECC1Q5M775 1068 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 HYIQ5T013 277 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 FAM102BQ5T8I3 360 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 ZNF697Q5TEC3 545 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 Q7L0L9 218 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 RNF149Q8NC42 400 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 MCPH1Q8NEM0 835 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 CLIC6Q96NY7 704 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 NT5C3AQ9H0P0 336 aa25.35■■□□□ 1.65
TDP1-206ENST00000553569 SRPRBQ9Y5M8 271 aaKnown RBP25.35■■□□□ 1.65
TDP1-206ENST00000553569 MGEA5O60502 916 aa25.34■■□□□ 1.65
TDP1-206ENST00000553569 BRD1O95696 1058 aa25.34■■□□□ 1.65
TDP1-206ENST00000553569 TMEM119Q4V9L6 283 aa25.34■■□□□ 1.65
TDP1-206ENST00000553569 GPR153Q6NV75 609 aa25.34■■□□□ 1.65
TDP1-206ENST00000553569 CALML4Q96GE6 196 aa25.34■■□□□ 1.65
TDP1-206ENST00000553569 FAM161BQ96MY7 647 aa25.34■■□□□ 1.65
TDP1-206ENST00000553569 DENND3A2RUS2 1198 aa25.33■■□□□ 1.65
TDP1-206ENST00000553569 ASAP2O43150 1006 aa25.33■■□□□ 1.65
TDP1-206ENST00000553569 GJB5O95377 273 aa25.33■■□□□ 1.65
TDP1-206ENST00000553569 SSBP05455 408 aaKnown RBP eCLIP25.33■■□□□ 1.65
TDP1-206ENST00000553569 CYP11B2P19099 503 aa25.33■■□□□ 1.65
TDP1-206ENST00000553569 ARL2P36404 184 aa25.33■■□□□ 1.65
TDP1-206ENST00000553569 MXD4Q14582 209 aaPredicted RBP25.33■■□□□ 1.65
TDP1-206ENST00000553569 KARSQ15046 597 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms