RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 FDXACB1Q9BRP7 624 aaPredicted RBP20.45■□□□□ 0.86
SHMT2-206ENST00000553529 TBKBP1A7MCY6 615 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 RPLP2P05387 115 aaKnown RBP20.44■□□□□ 0.86
SHMT2-206ENST00000553529 DARSP14868 501 aaKnown RBP20.44■□□□□ 0.86
SHMT2-206ENST00000553529 MCM7P33993 719 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 IRS1P35568 1242 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 PBX3P40426 434 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 TXKP42681 527 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 QARSP47897 775 aaKnown RBP20.44■□□□□ 0.86
SHMT2-206ENST00000553529 RHPN2Q8IUC4 686 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 CLP1Q92989 425 aaKnown RBP20.44■□□□□ 0.86
SHMT2-206ENST00000553529 MRPL38Q96DV4 380 aaKnown RBP20.44■□□□□ 0.86
SHMT2-206ENST00000553529 NLRP4Q96MN2 994 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 CYP26B1Q9NR63 512 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 LRFN2Q9ULH4 789 aa20.44■□□□□ 0.86
SHMT2-206ENST00000553529 MEIS3P2A8K0S8 358 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 C5orf67F2Z3F1 127 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 GPR182O15218 404 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 MARCH6O60337 910 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 MAFO75444 373 aaPredicted RBP20.43■□□□□ 0.86
SHMT2-206ENST00000553529 ITGB1P05556 798 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 EIF4BP23588 611 aaKnown RBP20.43■□□□□ 0.86
SHMT2-206ENST00000553529 RBM25P49756 843 aaKnown RBP20.43■□□□□ 0.86
SHMT2-206ENST00000553529 EPHA7Q15375 998 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 CALCRLQ16602 461 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 LRRC55Q6ZSA7 311 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 ADGRD2Q7Z7M1 963 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 TPH2Q8IWU9 490 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 CMTR2Q8IYT2 770 aaKnown RBP20.43■□□□□ 0.86
SHMT2-206ENST00000553529 RNF169Q8NCN4 708 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 HLA-CQ95604 372 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 C8orf76Q96K31 380 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 BRMS1Q9HCU9 246 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 SUCLA2Q9P2R7 463 aaPredicted RBP20.43■□□□□ 0.86
SHMT2-206ENST00000553529 PCDHB7Q9Y5E2 793 aa20.43■□□□□ 0.86
SHMT2-206ENST00000553529 LINC01565O15544 149 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 NEMFO60524 1076 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 SLITRK3O94933 977 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 ATF7P17544 494 aaPredicted RBP20.42■□□□□ 0.86
SHMT2-206ENST00000553529 TMOD1P28289 359 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 TRIM29Q14134 588 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 ZNF174Q15697 407 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 SLC24A5Q71RS6 500 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 KLHL23Q8NBE8 558 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 LPPQ93052 612 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 CEP170P1Q96L14 293 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 MTMR9Q96QG7 549 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 EIF2AK1Q9BQI3 630 aaKnown RBP20.42■□□□□ 0.86
SHMT2-206ENST00000553529 TTC12Q9H892 705 aaPredicted RBP20.42■□□□□ 0.86
SHMT2-206ENST00000553529 MINDY3Q9H8M7 445 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 MUC3AQ02505 3323 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 MYO7AQ13402 2215 aa20.42■□□□□ 0.86
SHMT2-206ENST00000553529 H3BQ06 376 aaPredicted RBP20.41■□□□□ 0.86
SHMT2-206ENST00000553529 TBX3O15119 743 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 P4HBP07237 508 aaKnown RBP20.41■□□□□ 0.86
SHMT2-206ENST00000553529 KCNA5P22460 613 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 YWHABP31946 246 aaKnown RBP20.41■□□□□ 0.86
SHMT2-206ENST00000553529 DLX2Q07687 328 aaPredicted RBP20.41■□□□□ 0.86
SHMT2-206ENST00000553529 CLLU1OSQ5K130 101 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 SAMD11Q96NU1 681 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 UHRF1Q96T88 793 aaPredicted RBP20.41■□□□□ 0.86
SHMT2-206ENST00000553529 UBE2ZQ9H832 354 aaPredicted RBP20.41■□□□□ 0.86
SHMT2-206ENST00000553529 XPNPEP1Q9NQW7 623 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 LMCD1Q9NZU5 365 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 PLAGL2Q9UPG8 496 aa20.41■□□□□ 0.86
SHMT2-206ENST00000553529 STAG3L1P0CL83 205 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 FAM189BP81408 668 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 XKR9Q5GH70 373 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 EP400NLQ6ZTU2 488 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 ECHDC2Q86YB7 292 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 CASD1Q96PB1 797 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 CWH43Q9H720 699 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 IFT122Q9HBG6 1241 aa20.4■□□□□ 0.86
SHMT2-206ENST00000553529 TYW1Q9NV66 732 aaKnown RBP20.4■□□□□ 0.86
SHMT2-206ENST00000553529 RBM10P98175 930 aaKnown RBP20.39■□□□□ 0.85
SHMT2-206ENST00000553529 HYAL1Q12794 435 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 EMC2Q15006 297 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 CLUL1Q15846 466 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 C4orf19Q8IY42 314 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.39■□□□□ 0.85
SHMT2-206ENST00000553529 SPPL3Q8TCT6 385 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 PIGOQ8TEQ8 1089 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 PRPF31Q8WWY3 499 aaKnown RBP20.39■□□□□ 0.85
SHMT2-206ENST00000553529 KHSRPQ92945 711 aaKnown RBP eCLIP20.39■□□□□ 0.85
SHMT2-206ENST00000553529 IGFLR1Q9H665 355 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 DHX33Q9H6R0 707 aaKnown RBP20.39■□□□□ 0.85
SHMT2-206ENST00000553529 CD320Q9NPF0 282 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 C1orf112Q9NSG2 853 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 PCDHA12Q9UN75 941 aa20.39■□□□□ 0.85
SHMT2-206ENST00000553529 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.38■□□□□ 0.85
SHMT2-206ENST00000553529 MED24O75448 989 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 SRGAP2CP0DJJ0 459 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 IL9P15248 144 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 POLGP54098 1239 aaPredicted RBP20.38■□□□□ 0.85
SHMT2-206ENST00000553529 SLFN12Q8IYM2 578 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 FBXO18Q8NFZ0 1043 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 HELQQ8TDG4 1101 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 ASAP3Q8TDY4 903 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 POF1BQ8WVV4 589 aa20.38■□□□□ 0.85
SHMT2-206ENST00000553529 HSD17B14Q9BPX1 270 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms