RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 MTRQ99707 1265 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 TTYH1Q9H313 450 aaPredicted RBP20.57■□□□□ 0.88
CPSF2-202ENST00000553427 TMX1Q9H3N1 280 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 ATP6V0A4Q9HBG4 840 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 XPNPEP1Q9NQW7 623 aa20.57■□□□□ 0.88
CPSF2-202ENST00000553427 ENPP3O14638 875 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 ASAP2O43150 1006 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 SF3A1Q15459 793 aaKnown RBP20.56■□□□□ 0.88
CPSF2-202ENST00000553427 HYIQ5T013 277 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 MYOCDQ8IZQ8 938 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 NLRP7Q8WX94 980 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 PPP1R16BQ96T49 567 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 RAD9AQ99638 391 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 GCOM2Q9BZD3 368 aaPredicted RBP20.56■□□□□ 0.88
CPSF2-202ENST00000553427 MTMR10Q9NXD2 777 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 ST3GAL5Q9UNP4 418 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 COL4A3BPQ9Y5P4 624 aa20.56■□□□□ 0.88
CPSF2-202ENST00000553427 TLL1O43897 1013 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 SLC34A2O95436 690 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 HTRA4P83105 476 aaPredicted RBP20.55■□□□□ 0.88
CPSF2-202ENST00000553427 PTPAQ15257 358 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 ECM1Q16610 540 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 Q7L0L9 218 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 RHPN2Q8IUC4 686 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 MCPH1Q8NEM0 835 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 TMEM143Q96AN5 459 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 SCLT1Q96NL6 688 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 MMTAG2Q9BU76 263 aaKnown RBP20.55■□□□□ 0.88
CPSF2-202ENST00000553427 SEMA6BQ9H3T3 888 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 GBF1Q92538 1859 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 CHD7Q9P2D1 2997 aa20.55■□□□□ 0.88
CPSF2-202ENST00000553427 VWA3AA6NCI4 1184 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 PP2D1A8MPX8 630 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 RBAK-RBAKDNI3L0D1 243 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 LAMTOR4Q0VGL1 99 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 NFX1Q12986 1120 aaKnown RBP20.54■□□□□ 0.88
CPSF2-202ENST00000553427 MXD4Q14582 209 aaPredicted RBP20.54■□□□□ 0.88
CPSF2-202ENST00000553427 PRPF31Q8WWY3 499 aaKnown RBP20.54■□□□□ 0.88
CPSF2-202ENST00000553427 ZBED2Q9BTP6 218 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 INO80BQ9C086 356 aaPredicted RBP20.54■□□□□ 0.88
CPSF2-202ENST00000553427 NKX2-4Q9H2Z4 354 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 ZNF576Q9H609 170 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 SLC28A3Q9HAS3 691 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 C1orf112Q9NSG2 853 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 KIAA1024Q9UPX6 916 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 INSL6Q9Y581 213 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 LOXHD1Q8IVV2 1947 aa20.54■□□□□ 0.88
CPSF2-202ENST00000553427 TTC3P53804 2025 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 A0A087WZ62 844 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 ARHGEF35A5YM69 484 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 CA3P07451 260 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 MYOGP15173 224 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 ARL2P36404 184 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 LONP1P36776 959 aaKnown RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 POU5F1BQ06416 359 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 DSC3Q14574 896 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 TMCO2Q7Z6W1 182 aaPredicted RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 RTN4RL1Q86UN2 441 aaPredicted RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 CRIPAKQ8N1N5 446 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 SP7Q8TDD2 431 aaPredicted RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 FDXACB1Q9BRP7 624 aaPredicted RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 IFT122Q9HBG6 1241 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 RGS18Q9NS28 235 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 DDX19AQ9NUU7 478 aaKnown RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 RNF216Q9NWF9 866 aaPredicted RBP20.53■□□□□ 0.88
CPSF2-202ENST00000553427 CLIC4Q9Y696 253 aa20.53■□□□□ 0.88
CPSF2-202ENST00000553427 MGEA5O60502 916 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 USO1O60763 962 aaKnown RBP20.52■□□□□ 0.88
CPSF2-202ENST00000553427 ZSCAN22P10073 491 aaPredicted RBP20.52■□□□□ 0.88
CPSF2-202ENST00000553427 CYP11B2P19099 503 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 SFPQP23246 707 aaKnown RBP eCLIP20.52■□□□□ 0.88
CPSF2-202ENST00000553427 PPP2R2DQ66LE6 453 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 FAM173BQ6P4H8 233 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 IFNLR1Q8IU57 520 aaPredicted RBP20.52■□□□□ 0.88
CPSF2-202ENST00000553427 NPAS4Q8IUM7 802 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 NLRP4Q96MN2 994 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 NT5C3AQ9H0P0 336 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 BMP2KQ9NSY1 1161 aaPredicted RBP20.52■□□□□ 0.88
CPSF2-202ENST00000553427 DNM3Q9UQ16 869 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 CDH23Q9H251 3354 aa20.52■□□□□ 0.88
CPSF2-202ENST00000553427 EYA4O95677 639 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 CDC25AP30304 524 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
CPSF2-202ENST00000553427 SARSP49591 514 aaKnown RBP20.51■□□□□ 0.87
CPSF2-202ENST00000553427 PCBP1Q15365 356 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPSF2-202ENST00000553427 PADI6Q6TGC4 694 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 SRGAP1Q7Z6B7 1085 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 KSR1Q8IVT5 923 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 ZNF668Q96K58 619 aaPredicted RBP20.51■□□□□ 0.87
CPSF2-202ENST00000553427 GUCD1Q96NT3 240 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 USP28Q96RU2 1077 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 ADAM2Q99965 735 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 NFKBIZQ9BYH8 718 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 BHMT2Q9H2M3 363 aa20.51■□□□□ 0.87
CPSF2-202ENST00000553427 RC3H2Q9HBD1 1191 aaKnown RBP20.51■□□□□ 0.87
CPSF2-202ENST00000553427 A0A087WWV3 80 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 DENND3A2RUS2 1198 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 C9IYK1 514 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 PHKA2P46019 1235 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 TAP1Q03518 808 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms