RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 QARSP47897 775 aaKnown RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 NPEPPSP55786 919 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 FAM189BP81408 668 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 TRIM29Q14134 588 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 SPOUT1Q5T280 376 aaKnown RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 NCAPH2Q6IBW4 605 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 DIS3L2Q8IYB7 885 aaKnown RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 PLVAPQ9BX97 442 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 NSUN3Q9H649 340 aaKnown RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 ATP6V0A4Q9HBG4 840 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 RGL1Q9NZL6 768 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
CDK4-215ENST00000553237 PLAGL2Q9UPG8 496 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.44
CDK4-215ENST00000553237 XIRP2A4UGR9 3374 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 IGKV6-21A0A0C4DH24 114 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 TBX3O15119 743 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 P4HBP07237 508 aaKnown RBP17.82■□□□□ 0.44
CDK4-215ENST00000553237 FGFR1P11362 822 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 ZSCAN20P17040 1043 aaPredicted RBP17.82■□□□□ 0.44
CDK4-215ENST00000553237 DNM2P50570 870 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 GUCY1B3Q02153 619 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 EPHA7Q15375 998 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 FAM43BQ6ZT52 329 aaPredicted RBP17.82■□□□□ 0.44
CDK4-215ENST00000553237 CCDC83Q8IWF9 413 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 ZNF579Q8NAF0 562 aaKnown RBP17.82■□□□□ 0.44
CDK4-215ENST00000553237 KLHL23Q8NBE8 558 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 LMAN2LQ9H0V9 348 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
CDK4-215ENST00000553237 SUCLA2Q9P2R7 463 aaPredicted RBP17.82■□□□□ 0.44
CDK4-215ENST00000553237 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
CDK4-215ENST00000553237 A0A087WZ62 844 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 WNT7AO00755 349 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 MAFO75444 373 aaPredicted RBP17.81■□□□□ 0.44
CDK4-215ENST00000553237 ITGB1P05556 798 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 KSR1Q8IVT5 923 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 SPPL3Q8TCT6 385 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 DYDC2Q96IM9 177 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 CEP170P1Q96L14 293 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 FDXACB1Q9BRP7 624 aaPredicted RBP17.81■□□□□ 0.44
CDK4-215ENST00000553237 GCOM2Q9BZD3 368 aaPredicted RBP17.81■□□□□ 0.44
CDK4-215ENST00000553237 CYP26B1Q9NR63 512 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 TMEM161AQ9NX61 479 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 RALGAPA2Q2PPJ7 1873 aa17.81■□□□□ 0.44
CDK4-215ENST00000553237 H3BQ06 376 aaPredicted RBP17.8■□□□□ 0.44
CDK4-215ENST00000553237 DKC1O60832 514 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDK4-215ENST00000553237 ATP2B1P20020 1258 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 DNAJB1P25685 340 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 CYP4A11Q02928 519 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 CAMK1Q14012 370 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 CTTNQ14247 550 aaKnown RBP17.8■□□□□ 0.44
CDK4-215ENST00000553237 LEXMQ3ZCV2 418 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 SLFN12Q8IYM2 578 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 RNF169Q8NCN4 708 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.8■□□□□ 0.44
CDK4-215ENST00000553237 P2RX5Q93086 422 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 KIF2CQ99661 725 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 LXNQ9BS40 222 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 IGFLR1Q9H665 355 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 ELAC1Q9H777 363 aaKnown RBP17.8■□□□□ 0.44
CDK4-215ENST00000553237 BMP2KQ9NSY1 1161 aaPredicted RBP17.8■□□□□ 0.44
CDK4-215ENST00000553237 TYW1Q9NV66 732 aaKnown RBP17.8■□□□□ 0.44
CDK4-215ENST00000553237 CLDND1Q9NY35 253 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
CDK4-215ENST00000553237 NCOR1O75376 2440 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 ZBTB39O15060 712 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 GTF2F1P35269 517 aaKnown RBP eCLIP17.79■□□□□ 0.444e-9■■■■■ 37.4
CDK4-215ENST00000553237 CDC42EP1Q00587 391 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 SPIRE1Q08AE8 756 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 CALCRLQ16602 461 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 NAALADL2Q58DX5 795 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 ECHDC2Q86YB7 292 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 TPH2Q8IWU9 490 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 C4orf19Q8IY42 314 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 PABPC5Q96DU9 382 aaKnown RBP17.79■□□□□ 0.44
CDK4-215ENST00000553237 JPH2Q9BR39 696 aaPredicted RBP17.79■□□□□ 0.44
CDK4-215ENST00000553237 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 PCDHB12Q9Y5F1 795 aa17.79■□□□□ 0.44
CDK4-215ENST00000553237 YWHABP31946 246 aaKnown RBP17.78■□□□□ 0.44
CDK4-215ENST00000553237 IRS1P35568 1242 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 TXKP42681 527 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 POLGP54098 1239 aaPredicted RBP17.78■□□□□ 0.44
CDK4-215ENST00000553237 HYAL1Q12794 435 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 SAFBQ15424 915 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDK4-215ENST00000553237 SLC7A3Q8WY07 619 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 TMEM143Q96AN5 459 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 C8orf76Q96K31 380 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 CASD1Q96PB1 797 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 EIF2AK1Q9BQI3 630 aaKnown RBP17.78■□□□□ 0.44
CDK4-215ENST00000553237 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 AAASQ9NRG9 546 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 RNF19AQ9NV58 838 aa17.78■□□□□ 0.44
CDK4-215ENST00000553237 NEMFO60524 1076 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 SLITRK3O94933 977 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 XKR9Q5GH70 373 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms