RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
CKAP4-202ENST00000552828 GNA11P29992 359 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 METAP2P50579 478 aaKnown RBP eCLIP13.39□□□□□ -0.27
CKAP4-202ENST00000552828 CLCN3P51790 818 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 NLRP11P59045 1033 aaKnown RBP13.39□□□□□ -0.27
CKAP4-202ENST00000552828 SIGLEC14Q08ET2 396 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 PRR16Q569H4 304 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 ANKRD54Q6NXT1 300 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 KCNT2Q6UVM3 1135 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 Q6ZUG5 572 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 PPP1R16BQ96T49 567 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 PRRX2Q99811 253 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 HIDE1A8MVS5 230 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 ZNF862O60290 1169 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 HOXB8P17481 243 aaPredicted RBP13.38□□□□□ -0.27
CKAP4-202ENST00000552828 TMOD1P28289 359 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 PPM1AP35813 382 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 IER5LQ5T953 404 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 EFCAB12Q6NXP0 572 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 SYCE2Q6PIF2 218 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
CKAP4-202ENST00000552828 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 FBXL6Q8N531 539 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 PRSS33Q8NF86 280 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 BICD2Q8TD16 824 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 ASIC4Q96FT7 647 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 TCF25Q9BQ70 676 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 ZDBF2Q9HCK1 2354 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 FNDC1Q4ZHG4 1894 aaPredicted RBP13.38□□□□□ -0.27
CKAP4-202ENST00000552828 PLXNA4Q9HCM2 1894 aa13.38□□□□□ -0.27
CKAP4-202ENST00000552828 LOXHD1Q8IVV2 1947 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 A0A0U1RQF3 1178 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 EOMESO95936 686 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 OATP04181 439 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
CKAP4-202ENST00000552828 ZSCAN20P17040 1043 aaPredicted RBP13.37□□□□□ -0.27
CKAP4-202ENST00000552828 TECP42680 631 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 GPC3P51654 580 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 USP11P51784 963 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 PTPN5P54829 565 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 KRT17Q04695 432 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 NTRK3Q16288 839 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 CLLU1OSQ5K130 101 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 PLPP4Q5VZY2 271 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 BRF1Q92994 677 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 RIT2Q99578 217 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 ENTPD7Q9NQZ7 604 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 DISC1Q9NRI5 854 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 TCEAL9Q9UHQ7 104 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 NAP1L2Q9ULW6 460 aaPredicted RBP13.37□□□□□ -0.27
CKAP4-202ENST00000552828 AKT3Q9Y243 479 aa13.37□□□□□ -0.27
CKAP4-202ENST00000552828 MSH4O15457 936 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 SFNP31947 248 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 PRKCEQ02156 737 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 TARBP2Q15633 366 aaKnown RBP13.36□□□□□ -0.27
CKAP4-202ENST00000552828 PTPN21Q16825 1174 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 TRMT1LQ7Z2T5 733 aaKnown RBP13.36□□□□□ -0.27
CKAP4-202ENST00000552828 SUGP1Q8IWZ8 645 aaKnown RBP13.36□□□□□ -0.27
CKAP4-202ENST00000552828 ABI1Q8IZP0 508 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 MRPL43Q8N983 215 aaKnown RBP13.36□□□□□ -0.27
CKAP4-202ENST00000552828 RSPH1Q8WYR4 309 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 TRAIPQ9BWF2 469 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
CKAP4-202ENST00000552828 PDRG1Q9NUG6 133 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
CKAP4-202ENST00000552828 DMDP11532 3685 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 MYO15AQ9UKN7 3530 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 C2orf71A6NGG8 1288 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 IFNAR1P17181 557 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 PBX3P40426 434 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 JAK3P52333 1124 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 EVCP57679 992 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 TCF15Q12870 199 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 UGCGQ16739 394 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 B3GNT9Q6UX72 402 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 RDM1Q8NG50 284 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 CASP10Q92851 521 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 PHKBQ93100 1093 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 NIFKQ9BYG3 293 aaKnown RBP13.35□□□□□ -0.27
CKAP4-202ENST00000552828 SH3GLB2Q9NR46 395 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 CHST12Q9NRB3 414 aa13.35□□□□□ -0.27
CKAP4-202ENST00000552828 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms