RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 RNF169Q8NCN4 708 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 GLT8D2Q9H1C3 349 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 TBC1D22BQ9NU19 505 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 BARHL2Q9NY43 387 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 CEP131Q9UPN4 1083 aa19.17■□□□□ 0.66
CACNB3-222ENST00000552465 PRR23AA6NEV1 266 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 hCG_1984214I3L0E3 225 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 CXCL14O95715 111 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 ASGR2P07307 311 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 CYP3A4P08684 503 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 WEE2P0C1S8 567 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 EIF4BP23588 611 aaKnown RBP19.16■□□□□ 0.66
CACNB3-222ENST00000552465 NECTIN1Q15223 517 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 CREB3L3Q68CJ9 461 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 ASTLQ6HA08 431 aaPredicted RBP19.16■□□□□ 0.66
CACNB3-222ENST00000552465 ZNF746Q6NUN9 644 aaPredicted RBP19.16■□□□□ 0.66
CACNB3-222ENST00000552465 EFCAB12Q6NXP0 572 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 APOA5Q6Q788 366 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 ZDHHC14Q8IZN3 488 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 LINC01465Q8N7H1 131 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 ZNF713Q8N859 430 aaPredicted RBP19.16■□□□□ 0.66
CACNB3-222ENST00000552465 CRYGNQ8WXF5 182 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 MAP7D2Q96T17 732 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 ZNF577Q9BSK1 485 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 LIMD1Q9UGP4 676 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 AKT3Q9Y243 479 aa19.16■□□□□ 0.66
CACNB3-222ENST00000552465 A0A0U1RQF3 1178 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 EOMESO95936 686 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 PSAPP07602 524 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 BMS1Q14692 1282 aaKnown RBP19.15■□□□□ 0.66
CACNB3-222ENST00000552465 ATAT1Q5SQI0 421 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 RARS2Q5T160 578 aaKnown RBP19.15■□□□□ 0.66
CACNB3-222ENST00000552465 JAKMIP3Q5VZ66 844 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 ZNF598Q86UK7 904 aaKnown RBP19.15■□□□□ 0.66
CACNB3-222ENST00000552465 SMAP1Q8IYB5 467 aaPredicted RBP19.15■□□□□ 0.66
CACNB3-222ENST00000552465 ZNF710Q8N1W2 664 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 C12orf76Q8N812 135 aaPredicted RBP19.15■□□□□ 0.66
CACNB3-222ENST00000552465 HELQQ8TDG4 1101 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 GABBR1Q9UBS5 961 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 PCDHA10Q9Y5I2 948 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 PLXNA3P51805 1871 aa19.15■□□□□ 0.66
CACNB3-222ENST00000552465 USP34Q70CQ2 3546 aa19.14■□□□□ 0.66
CACNB3-222ENST00000552465 NT5C1B-RDH14C9J2C7 533 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 TMOD1P28289 359 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 ALDH7A1P49419 539 aaKnown RBP19.14■□□□□ 0.65
CACNB3-222ENST00000552465 METAP2P50579 478 aaKnown RBP eCLIP19.14■□□□□ 0.65
CACNB3-222ENST00000552465 CLCN5P51795 746 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 BCAR1P56945 870 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 RTN1Q16799 776 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 KANK3Q6NY19 840 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 PLCD3Q8N3E9 789 aa19.14■□□□□ 0.65
CACNB3-222ENST00000552465 TDRD5Q8NAT2 981 aaKnown RBP19.14■□□□□ 0.65
CACNB3-222ENST00000552465 DARSP14868 501 aaKnown RBP19.13■□□□□ 0.65
CACNB3-222ENST00000552465 CA8P35219 290 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 KIAA1841Q6NSI8 718 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 LRRC71Q8N4P6 559 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 ZNF668Q96K58 619 aaPredicted RBP19.13■□□□□ 0.65
CACNB3-222ENST00000552465 FAM167AQ96KS9 214 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 MRPL9Q9BYD2 267 aaKnown RBP19.13■□□□□ 0.65
CACNB3-222ENST00000552465 MFSD1Q9H3U5 465 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 DZANK1Q9NVP4 752 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 DBR1Q9UK59 544 aaKnown RBP19.13■□□□□ 0.65
CACNB3-222ENST00000552465 BRPF3Q9ULD4 1205 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 USTQ9Y2C2 406 aa19.13■□□□□ 0.65
CACNB3-222ENST00000552465 GPC3P51654 580 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 FRMD5Q7Z6J6 570 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 VPS52Q8N1B4 723 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 SLC22A17Q8WUG5 538 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 NKD2Q969F2 451 aaPredicted RBP19.12■□□□□ 0.65
CACNB3-222ENST00000552465 TMEM169Q96HH4 297 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 ZBP1Q9H171 429 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 FAM217BQ9NTX9 383 aaPredicted RBP19.12■□□□□ 0.65
CACNB3-222ENST00000552465 DACT1Q9NYF0 836 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 IRAK3Q9Y616 596 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 PTPRZ1P23471 2315 aaPredicted RBP19.12■□□□□ 0.65
CACNB3-222ENST00000552465 EVPLQ92817 2033 aa19.12■□□□□ 0.65
CACNB3-222ENST00000552465 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.11■□□□□ 0.65
CACNB3-222ENST00000552465 ZBTB43O43298 467 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 EPCAMP16422 314 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 FGFR4P22455 802 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 SETQ01105 290 aaPredicted RBP19.11■□□□□ 0.65
CACNB3-222ENST00000552465 EXOSC10Q01780 885 aaKnown RBP19.11■□□□□ 0.65
CACNB3-222ENST00000552465 MCTP2Q6DN12 878 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 DDX53Q86TM3 631 aaKnown RBP19.11■□□□□ 0.65
CACNB3-222ENST00000552465 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 AUTS2Q8WXX7 1259 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 ESYT1Q9BSJ8 1104 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 CYP26B1Q9NR63 512 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 NRBP2Q9NSY0 501 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 TCEAL9Q9UHQ7 104 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 SAMM50Q9Y512 469 aa19.11■□□□□ 0.65
CACNB3-222ENST00000552465 ADAMTS3O15072 1205 aa19.1■□□□□ 0.65
CACNB3-222ENST00000552465 ZNF862O60290 1169 aa19.1■□□□□ 0.65
CACNB3-222ENST00000552465 CTSAP10619 480 aa19.1■□□□□ 0.65
CACNB3-222ENST00000552465 POLGP54098 1239 aaPredicted RBP19.1■□□□□ 0.65
CACNB3-222ENST00000552465 GIT2Q14161 759 aa19.1■□□□□ 0.65
CACNB3-222ENST00000552465 PRR16Q569H4 304 aa19.1■□□□□ 0.65
CACNB3-222ENST00000552465 TMEM173Q86WV6 379 aaPredicted RBP19.1■□□□□ 0.65
CACNB3-222ENST00000552465 SCLT1Q96NL6 688 aa19.1■□□□□ 0.65
CACNB3-222ENST00000552465 CHST12Q9NRB3 414 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms