RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 GPC3P51654 580 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 NLRP11P59045 1033 aaKnown RBP15.71■□□□□ 0.11
DDX54-210ENST00000552375 PSMC5P62195 406 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 CALCRLQ16602 461 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 MTERF2Q49AM1 385 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 PAN2Q504Q3 1202 aaKnown RBP15.71■□□□□ 0.11
DDX54-210ENST00000552375 SLC24A5Q71RS6 500 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 HAS1Q92839 578 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 ADAM2Q99965 735 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 NIFKQ9BYG3 293 aaKnown RBP15.71■□□□□ 0.11
DDX54-210ENST00000552375 LMAN2LQ9H0V9 348 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
DDX54-210ENST00000552375 LRFN2Q9ULH4 789 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 KIF3AQ9Y496 699 aa15.71■□□□□ 0.11
DDX54-210ENST00000552375 TMEM150BA6NC51 233 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 C9IYK1 514 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 EML1O00423 815 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 NEMFO60524 1076 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
DDX54-210ENST00000552375 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
DDX54-210ENST00000552375 GATMP50440 423 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 DSC3Q14574 896 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 SCLT1Q96NL6 688 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 FOXP1Q9H334 677 aaPredicted RBP15.7■□□□□ 0.1
DDX54-210ENST00000552375 NSUN3Q9H649 340 aaKnown RBP15.7■□□□□ 0.1
DDX54-210ENST00000552375 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.7■□□□□ 0.1
DDX54-210ENST00000552375 PCDHB7Q9Y5E2 793 aa15.7■□□□□ 0.1
DDX54-210ENST00000552375 RALGAPA2Q2PPJ7 1873 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 IGKV6-21A0A0C4DH24 114 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 H3BQV1 296 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 GRM6O15303 877 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 DARSP14868 501 aaKnown RBP15.69■□□□□ 0.1
DDX54-210ENST00000552375 QARSP47897 775 aaKnown RBP15.69■□□□□ 0.1
DDX54-210ENST00000552375 DRP2Q13474 957 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 ZNF174Q15697 407 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 TCEAL5Q5H9L2 206 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 ANO5Q75V66 913 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 NLRP7Q8WX94 980 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 P2RX5Q93086 422 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 NECAB3Q96P71 396 aaPredicted RBP15.69■□□□□ 0.1
DDX54-210ENST00000552375 TMEM60Q9H2L4 133 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 TMEM161AQ9NX61 479 aa15.69■□□□□ 0.1
DDX54-210ENST00000552375 NLRC5Q86WI3 1866 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
DDX54-210ENST00000552375 BAG4O95429 457 aaKnown RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 P4HBP07237 508 aaKnown RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 KCNA5P22460 613 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 TXKP42681 527 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 SPIRE1Q08AE8 756 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 CUL4AQ13619 759 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 COL19A1Q14993 1142 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 NAALADL2Q58DX5 795 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 TTC38Q5R3I4 469 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 SLFN12Q8IYM2 578 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 ZNF668Q96K58 619 aaPredicted RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 LXNQ9BS40 222 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 ELAC1Q9H777 363 aaKnown RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 ATP6V0A4Q9HBG4 840 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 NOL7Q9UMY1 257 aaKnown RBP15.68■□□□□ 0.1
DDX54-210ENST00000552375 PPME1Q9Y570 386 aa15.68■□□□□ 0.1
DDX54-210ENST00000552375 VPS37CA5D8V6 355 aaPredicted RBP15.67■□□□□ 0.1
DDX54-210ENST00000552375 TBKBP1A7MCY6 615 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 DDX11L8A8MPP1 907 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
DDX54-210ENST00000552375 MAFO75444 373 aaPredicted RBP15.67■□□□□ 0.1
DDX54-210ENST00000552375 DNM2P50570 870 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 FAM189BP81408 668 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 CYP4A11Q02928 519 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 EPHA7Q15375 998 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 LEXMQ3ZCV2 418 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 ZNF410Q86VK4 478 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 CYP26B1Q9NR63 512 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
DDX54-210ENST00000552375 WRAP73Q9P2S5 460 aaPredicted RBP15.67■□□□□ 0.1
DDX54-210ENST00000552375 PLAGL2Q9UPG8 496 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 MYO7AQ13402 2215 aa15.67■□□□□ 0.1
DDX54-210ENST00000552375 KIAA1671Q9BY89 1806 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 POTEMA6NI47 508 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 HOXA2O43364 376 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 ITGB1P05556 798 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 FGFR1P11362 822 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 ZSCAN20P17040 1043 aaPredicted RBP15.66■□□□□ 0.1
DDX54-210ENST00000552375 FAM102BQ5T8I3 360 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 LARP1BQ659C4 914 aaKnown RBP15.66■□□□□ 0.1
DDX54-210ENST00000552375 HSCBQ8IWL3 235 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 C4orf19Q8IY42 314 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 KLHL23Q8NBE8 558 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 SLC7A3Q8WY07 619 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 PABPC5Q96DU9 382 aaKnown RBP15.66■□□□□ 0.1
DDX54-210ENST00000552375 DYDC2Q96IM9 177 aa15.66■□□□□ 0.1
DDX54-210ENST00000552375 GCOM2Q9BZD3 368 aaPredicted RBP15.66■□□□□ 0.1
DDX54-210ENST00000552375 ALG13Q9NP73 1137 aaKnown RBP15.66■□□□□ 0.1
DDX54-210ENST00000552375 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms