RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 LONRF1Q17RB8 773 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 PAN2Q504Q3 1202 aaKnown RBP5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 KIAA1841Q6NSI8 718 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 TIGD7Q6NT04 549 aaPredicted RBP5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 NPNTQ6UXI9 565 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 DCP2Q8IU60 420 aaKnown RBP5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 ARRDC4Q8NCT1 418 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 MYRIPQ8NFW9 859 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 SGCZQ96LD1 299 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 TUBGCP5Q96RT8 1024 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 FOXB1Q99853 325 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 B3GNT5Q9BYG0 378 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 HSPBP1Q9NZL4 362 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 PRSS50Q9UI38 385 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 SCOCQ9UIL1 159 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 DENND2AQ9ULE3 1009 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 PALD1Q9ULE6 856 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 WASF3Q9UPY6 502 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 DMTF1Q9Y222 760 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 POLHQ9Y253 713 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 SIT1Q9Y3P8 196 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 TAF6LQ9Y6J9 622 aa5.08□□□□□ -1.6
LSM6P2-201ENST00000552208 CCDC154A6NI56 674 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 NFIBO00712 420 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 PIP5K1CO60331 668 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 PQBP1O60828 265 aaKnown RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CELA3BP08861 270 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 HOXA10P31260 410 aaPredicted RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CD96P40200 585 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CHRNEQ04844 493 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 DBPQ10586 325 aaPredicted RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CHAF1AQ13111 956 aaPredicted RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 SNX17Q15036 470 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 NR0B2Q15466 257 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 MSMPQ1L6U9 139 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 KIAA0753Q2KHM9 967 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 ANO6Q4KMQ2 910 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 SWSAP1Q6NVH7 229 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 DARS2Q6PI48 645 aaKnown RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CCDC149Q6ZUS6 474 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CAMKK1Q8N5S9 505 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 NUP43Q8NFH3 380 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 ATXN2LQ8WWM7 1075 aaKnown RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 ERCC4Q92889 916 aaPredicted RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 FERMT2Q96AC1 680 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 SYTL4Q96C24 671 aaPredicted RBP5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 PGBD4Q96DM1 585 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 MISP3Q96FF7 219 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 ALPK1Q96QP1 1244 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 CASS4Q9NQ75 786 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 TMEM59LQ9UK28 342 aa5.07□□□□□ -1.6
LSM6P2-201ENST00000552208 MYPNQ86TC9 1320 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 A0A1W2PQ27 194 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 A0A1W2PQ64 194 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 A0A1W2PQC6 194 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 A0A1W2PQD8 194 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 PRAMEF22A3QJZ6 481 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 GOLIM4O00461 696 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 TBX3O15119 743 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SRGAP3O43295 1099 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 FURINP09958 794 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 HTR1BP28222 390 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SLC16A1P53985 500 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SLC6A3Q01959 620 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 DSC2Q02487 901 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 GRIN1Q05586 938 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 ADCY2Q08462 1091 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 BNIP3Q12983 259 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 MALLQ13021 153 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 STK3Q13188 491 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 IKZF1Q13422 519 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 ADRM1Q16186 407 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 C3orf36Q3SXR2 165 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 RNF220Q5VTB9 566 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 PRAMEF18Q5VWM3 479 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SLFN12LQ6IEE8 588 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 C1orf228Q6PIY5 440 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 MILR1Q7Z6M3 343 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SKAP1Q86WV1 359 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SPPL2CQ8IUH8 684 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 MARCH10Q8NA82 808 aaPredicted RBP5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 PDZD8Q8NEN9 1154 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 VPS37AQ8NEZ2 397 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SHISA4Q96DD7 197 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 CGRRF1Q99675 332 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 HERPUD2Q9BSE4 406 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 AMNQ9BXJ7 453 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 PITHD1Q9GZP4 211 aaPredicted RBP5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 TRMT13Q9NUP7 481 aaKnown RBP5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 SLAMF8Q9P0V8 285 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 PCDHGB6Q9Y5F9 930 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 CDY2AQ9Y6F7 541 aa5.06□□□□□ -1.6
LSM6P2-201ENST00000552208 DTNBO60941 627 aa5.05□□□□□ -1.6
LSM6P2-201ENST00000552208 HALP42357 657 aa5.05□□□□□ -1.6
LSM6P2-201ENST00000552208 RGS3P49796 1198 aa5.05□□□□□ -1.6
LSM6P2-201ENST00000552208 CACNB3P54284 484 aa5.05□□□□□ -1.6
LSM6P2-201ENST00000552208 BCAR1P56945 870 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms