RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TMEM174Q8WUU8 243 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 DRC1Q96MC2 740 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 ACCSQ96QU6 501 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 ST6GALNAC4Q9H4F1 302 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 ANKZF1Q9H8Y5 726 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 A1CFQ9NQ94 594 aaKnown RBP15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 FAM53CQ9NYF3 392 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 PCDHA10Q9Y5I2 948 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 BZW2Q9Y6E2 419 aaKnown RBP15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 CAPN6Q9Y6Q1 641 aa15.33■□□□□ 0.04
RAB3IP-216ENST00000552199 MYH10P35580 1976 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 SRGAP2O75044 1071 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 RGS20O76081 388 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 KCNA2P16389 499 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 FMO5P49326 533 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 BMS1Q14692 1282 aaKnown RBP15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 XKR9Q5GH70 373 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 RNF10Q8N5U6 811 aaKnown RBP15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 MSANTD4Q8NCY6 345 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 SH2D3AQ9BRG2 576 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
RAB3IP-216ENST00000552199 A0A087X0T9 212 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 EXOC3O60645 756 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 FAM228BP0C875 321 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 NPEPPSP55786 919 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 JAM2P57087 298 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 GTF2BQ00403 316 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 PLA2G4FQ68DD2 849 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 HAUS6Q7Z4H7 955 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 C12orf56Q8IXR9 622 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 ANKRD13CQ8N6S4 541 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 ALS2CR12Q96Q35 445 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 SALL4Q9UJQ4 1053 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 AJAP1Q9UKB5 411 aaPredicted RBP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 NFASCO94856 1347 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 STAM2O75886 525 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 DDNO94850 711 aaPredicted RBP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 PRKCIP41743 596 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 PTK2Q05397 1052 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 CKAP4Q07065 602 aaKnown RBP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 VGLL4Q14135 290 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 ENOX2Q16206 610 aaKnown RBP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 ANO5Q75V66 913 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 ZNF571Q7Z3V5 609 aaPredicted RBP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 CDHR1Q96JP9 859 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 ADAMTS1Q9UHI8 967 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 SNX12Q9UMY4 172 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 LOC285556D6RIA3 1793 aa15.31■□□□□ 0.04
RAB3IP-216ENST00000552199 PRLRP16471 622 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 NCKAP1LP55160 1127 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 PEX3P56589 373 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 BFSP1Q12934 665 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 BRD3Q15059 726 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 IQCEQ6IPM2 695 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 OTUD6AQ7L8S5 288 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 TRMT1LQ7Z2T5 733 aaKnown RBP15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 SLC17A8Q8NDX2 589 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 MMS19Q96T76 1030 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 ADARB2Q9NS39 739 aaKnown RBP15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 GABBR1Q9UBS5 961 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 RAB21Q9UL25 225 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 LCTP09848 1927 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 PTPRFP10586 1907 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 DOCK5Q9H7D0 1870 aa15.3■□□□□ 0.04
RAB3IP-216ENST00000552199 SPATA31C2B4DYI2 1134 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 ATP8B1O43520 1251 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 STBD1O95210 358 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 ANXA13P27216 316 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 SNRPFP62306 86 aaKnown RBP15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 NAB2Q15742 525 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 CBWD6Q4V339 395 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 CBWD3Q5JTY5 395 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 CBWD5Q5RIA9 395 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 FAM102BQ5T8I3 360 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 GJB7Q6PEY0 223 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 DLK2Q6UY11 383 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 CHST13Q8NET6 341 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 ATP6V0A1Q93050 837 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 RPGRIP1Q96KN7 1286 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 IWS1Q96ST2 819 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 PCIF1Q9H4Z3 704 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 CCDC151A5D8V7 595 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 TISP43B9A030 160 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 SLC16A4O15374 487 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 ZNF862O60290 1169 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 PSAPP07602 524 aa15.29■□□□□ 0.04
RAB3IP-216ENST00000552199 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms