RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	JAM2	P57087	298 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	ERVK-21	P61565	698 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	RPL11	P62913	178 aa	Known RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	ABHD18	Q0P651	414 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	SART3	Q15020	963 aa	Known RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	KSR2	Q6VAB6	950 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	GPR155	Q7Z3F1	870 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	OSTM1	Q86WC4	334 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PROSER1	Q86XN7	944 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PASD1	Q8IV76	773 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	CHMP4C	Q96CF2	233 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	SLC39A13	Q96H72	371 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	LRRC37B	Q96QE4	947 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PSMD1	Q99460	953 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	BARX1	Q9HBU1	254 aa	Predicted RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	GPR27	Q9NS67	375 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	C14orf119	Q9NWQ9	140 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	OXSM	Q9NWU1	459 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	B4GALT6	Q9UBX8	382 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZFR2	Q9UPR6	939 aa	Known RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZKSCAN5	Q9Y2L8	839 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	LUC7L2	Q9Y383	392 aa	Known RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA8	Q9Y5G5	932 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA7	Q9Y5G6	932 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA6	Q9Y5G7	932 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA3	Q9Y5H0	932 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHGA2	Q9Y5H1	932 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855	TNFRSF18	Q9Y5U5	241 aa		4.05	□□□□□ -1.76
CPNE8-208	ENST00000551855		B4E1Z4	1266 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZEB2	O60315	1214 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	GAS7	O60861	476 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	ABLIM3	O94929	683 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	AMY2A	P04746	511 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	MYB	P10242	640 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	AMY2B	P19961	511 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	KPNA1	P52294	538 aa	Predicted RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	SCAND1	P57086	179 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	NANOS3	P60323	173 aa	Known RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	DPT	Q07507	201 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	HNRNPA0	Q13151	305 aa	Known RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	PAK1	Q13153	545 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	INAVA	Q3KP66	663 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	LSM12	Q3MHD2	195 aa	Known RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	ACBD5	Q5T8D3	534 aa	Predicted RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	FAM102B	Q5T8I3	360 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	AGBL4	Q5VU57	503 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	RBM12B	Q8IXT5	1001 aa	Known RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	CHST14	Q8NCH0	376 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	LRGUK	Q96M69	825 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	RPS6KC1	Q96S38	1066 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	ORAI3	Q9BRQ5	295 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	CSRNP2	Q9H175	543 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	SLC12A5	Q9H2X9	1139 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	CDIP1	Q9H305	208 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	SEC61A2	Q9H9S3	476 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	CATSPERZ	Q9NTU4	200 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	DDX20	Q9UHI6	824 aa	Known RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	APOBEC2	Q9Y235	224 aa	Known RBP	4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	PTPN22	Q9Y2R2	807 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	PCDHB4	Q9Y5E5	795 aa		4.04	□□□□□ -1.76
CPNE8-208	ENST00000551855	VSTM5	A8MXK1	200 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	NKRF	O15226	690 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	CYP7B1	O75881	506 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	ZBTB48	P10074	688 aa	Predicted RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	PF4V1	P10720	104 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	PDE6A	P16499	860 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	LSS	P48449	732 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	PTH1R	Q03431	593 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	KRTAP15-1	Q3LI76	137 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	HS1BP3	Q53T59	392 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	BROX	Q5VW32	411 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	PPP4R4	Q6NUP7	873 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	PGM2L1	Q6PCE3	622 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855		Q6ZSN1	163 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855		Q6ZUG5	572 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	RALYL	Q86SE5	291 aa	Known RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	TAX1BP1	Q86VP1	789 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	FUK	Q8N0W3	1084 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	C2orf69	Q8N8R5	385 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	TGFBRAP1	Q8WUH2	860 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	FBXW5	Q969U6	566 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	TMEM169	Q96HH4	297 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	AHCYL2	Q96HN2	611 aa	Known RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	CCDC136	Q96JN2	1154 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	LMF1	Q96S06	567 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	TMEM209	Q96SK2	561 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	MPHOSPH6	Q99547	160 aa	Known RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	ALG1	Q9BT22	464 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	CELF4	Q9BZC1	486 aa	Known RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	ARNT2	Q9HBZ2	717 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	SMURF1	Q9HCE7	757 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	CABP5	Q9NP86	173 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	ANLN	Q9NQW6	1124 aa		4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.03	□□□□□ -1.76
CPNE8-208	ENST00000551855	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms