RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 METTL13Q8N6R0 699 aa17.41■□□□□ 0.38
CACNB3-220ENST00000551716 GPR161Q8N6U8 529 aaKnown RBP17.41■□□□□ 0.38
CACNB3-220ENST00000551716 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
CACNB3-220ENST00000551716 NXPE3Q969Y0 559 aa17.41■□□□□ 0.38
CACNB3-220ENST00000551716 LNPKQ9C0E8 428 aa17.41■□□□□ 0.38
CACNB3-220ENST00000551716 ZBP1Q9H171 429 aa17.41■□□□□ 0.38
CACNB3-220ENST00000551716 SENP2Q9HC62 589 aa17.41■□□□□ 0.38
CACNB3-220ENST00000551716 MAGEB2O15479 319 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACNB3-220ENST00000551716 LETM2Q2VYF4 491 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 CLLU1OSQ5K130 101 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 KANK3Q6NY19 840 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 MIS18BP1Q6P0N0 1132 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 PDXDC2PQ6P474 469 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 ABHD15Q6UXT9 468 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 RNF169Q8NCN4 708 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 EMILIN2Q9BXX0 1053 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 AGO4Q9HCK5 861 aaKnown RBP17.4■□□□□ 0.38
CACNB3-220ENST00000551716 ZNF302Q9NR11 478 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 DACT1Q9NYF0 836 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 CEP131Q9UPN4 1083 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 DMXL1Q9Y485 3027 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 CEP250Q9BV73 2442 aa17.4■□□□□ 0.38
CACNB3-220ENST00000551716 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-220ENST00000551716 EIF4BP23588 611 aaKnown RBP17.39■□□□□ 0.37
CACNB3-220ENST00000551716 TMOD1P28289 359 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 PHLDB3Q6NSJ2 640 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 ELMSAN1Q6PJG2 1045 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 CYP26C1Q6V0L0 522 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 TMTC2Q8N394 836 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-220ENST00000551716 STAMQ92783 540 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 MAP7D2Q96T17 732 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 SIT1Q9Y3P8 196 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 ACACBO00763 2458 aa17.39■□□□□ 0.37
CACNB3-220ENST00000551716 ZBTB42B2RXF5 422 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 NT5C1B-RDH14C9J2C7 533 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 C22orf31O95567 290 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 VTNP04004 478 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 SP9P0CG40 484 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 ARP10275 920 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-220ENST00000551716 UBE2SQ16763 222 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 RSPO4Q2I0M5 234 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-220ENST00000551716 C1orf210Q8IVY1 113 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 CKAP2LQ8IYA6 745 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 IGDCC4Q8TDY8 1250 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 PPP1R16BQ96T49 567 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 DPP7Q9UHL4 492 aa17.38■□□□□ 0.37
CACNB3-220ENST00000551716 OTOGLQ3ZCN5 2332 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 MEIS1O00470 390 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 CFHP08603 1231 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 KLRC2P26717 231 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 NLRP11P59045 1033 aaKnown RBP17.37■□□□□ 0.37
CACNB3-220ENST00000551716 SWSAP1Q6NVH7 229 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
CACNB3-220ENST00000551716 PLEKHM2Q8IWE5 1019 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 ZNF654Q8IZM8 581 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 CMASQ8NFW8 434 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-220ENST00000551716 AUTS2Q8WXX7 1259 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 RIN2Q8WYP3 895 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-220ENST00000551716 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 MTA3Q9BTC8 594 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 RHOBTB2Q9BYZ6 727 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 TBC1D17Q9HA65 648 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 LOXHD1Q8IVV2 1947 aa17.37■□□□□ 0.37
CACNB3-220ENST00000551716 KRBA1A5PL33 1030 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 KINO60870 393 aaKnown RBP17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CCNE2O96020 404 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CYP21A2P08686 494 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CALM1P0DP23 149 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CALM2P0DP24 149 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CALM3P0DP25 149 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 SRFP11831 508 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 SKIP12755 728 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 KIAA0319Q5VV43 1072 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 NIPA1Q7RTP0 329 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CCDC60Q8IWA6 550 aaPredicted RBP17.36■□□□□ 0.37
CACNB3-220ENST00000551716 SLC44A3Q8N4M1 653 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 SRBD1Q8N5C6 995 aaKnown RBP17.36■□□□□ 0.37
CACNB3-220ENST00000551716 SECISBP2LQ93073 1101 aaKnown RBP17.36■□□□□ 0.37
CACNB3-220ENST00000551716 ADAMTS10Q9H324 1103 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 AKT3Q9Y243 479 aa17.36■□□□□ 0.37
CACNB3-220ENST00000551716 KMT2BQ9UMN6 2715 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-220ENST00000551716 PRR5-ARHGAP8B1AHC4 643 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 E7EWF7 191 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 NARSO43776 548 aaKnown RBP17.35■□□□□ 0.37
CACNB3-220ENST00000551716 ZC3H11AO75152 810 aaKnown RBP eCLIP17.35■□□□□ 0.37
CACNB3-220ENST00000551716 ZNF76P36508 570 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 ARHGAP8P85298 464 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 CDC42EP1Q00587 391 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 SUMF1Q8NBK3 374 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 EPS15L1Q9UBC2 864 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 CA14Q9ULX7 337 aa17.35■□□□□ 0.37
CACNB3-220ENST00000551716 MAFBQ9Y5Q3 323 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-220ENST00000551716 GALTP07902 379 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms