RNA–Protein interactions for RNA: ENST00000551710.1

CNOT2-233, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-233	ENST00000551710	CATSPERE	Q5SY80	951 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	KANK2	Q63ZY3	851 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	GRAMD4	Q6IC98	578 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	LRP10	Q7Z4F1	713 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	GSPT2	Q8IYD1	628 aa	Known RBP	4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	JMY	Q8N9B5	988 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	ZSWIM4	Q9H7M6	989 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	NRDE2	Q9H7Z3	1164 aa		4.87	□□□□□ -1.63
CNOT2-233	ENST00000551710	SLC12A8	A0AV02	714 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	NAT1	P18440	290 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	KRT4	P19013	534 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	RIN1	Q13671	783 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	ANKRD35	Q8N283	1001 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	C2orf69	Q8N8R5	385 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	SH3TC2	Q8TF17	1288 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	SREK1	Q8WXA9	508 aa	Known RBP	4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	MPHOSPH9	Q99550	1183 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	KCNH7	Q9NS40	1196 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	SAMD15	Q9P1V8	674 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	SH3BP1	Q9Y3L3	701 aa		4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	TNPO3	Q9Y5L0	923 aa	Known RBP	4.86	□□□□□ -1.63
CNOT2-233	ENST00000551710	DVL2	O14641	736 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	DNAJC8	O75937	253 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	ZBTB48	P10074	688 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	SDS	P20132	328 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	ATP2C1	P98194	919 aa	Predicted RBP	4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	HGFAC	Q04756	655 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	ADAM15	Q13444	863 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	ZNF662	Q6ZS27	426 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	RPUSD2	Q8IZ73	545 aa	Known RBP	4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	MKL1	Q969V6	931 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	MRPL4	Q9BYD3	311 aa	Known RBP	4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	OR10A5	Q9H207	317 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	PIF1	Q9H611	641 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	B3GALT1	Q9Y5Z6	326 aa		4.85	□□□□□ -1.63
CNOT2-233	ENST00000551710	GOLGA8B	A8MQT2	603 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	OPA1	O60313	960 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	HIP1R	O75146	1068 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	NUDT3	O95989	172 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	PEX11B	O96011	259 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	RGS3	P49796	1198 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	SCNN1G	P51170	649 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	SLC25A3	Q00325	362 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	CCDC144B	Q3MJ40	725 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	TMEM200B	Q69YZ2	307 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	PCSK4	Q6UW60	755 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	DLG3	Q92796	817 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	WDR26	Q9H7D7	661 aa		4.84	□□□□□ -1.63
CNOT2-233	ENST00000551710	NISCH	Q9Y2I1	1504 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	KCNQ2	O43526	872 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	FAM20B	O75063	409 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	ASMTL	O95671	621 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	KIF11	P52732	1056 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	PIK3R6	Q5UE93	754 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710		Q6ZPA2	131 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710		Q6ZRM9	215 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	GPR150	Q8NGU9	434 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	HAS1	Q92839	578 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	VOPP1	Q96AW1	172 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	MIEF2	Q96C03	454 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	RPL10L	Q96L21	214 aa	Known RBP	4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	GPRC5B	Q9NZH0	403 aa		4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.83	□□□□□ -1.64
CNOT2-233	ENST00000551710	PCSK5	Q92824	1860 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	PTPDC1	A2A3K4	754 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	PMS2P1	A4D2B8	440 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	PLD2	O14939	933 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	GC	P02774	474 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	PTX3	P26022	381 aa	Predicted RBP	4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	SDHA	P31040	664 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	PTGS2	P35354	604 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	MAN2A2	P49641	1150 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	MECP2	P51608	486 aa	Known RBP	4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	SLC6A3	Q01959	620 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	BCL6B	Q8N143	479 aa	Predicted RBP	4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	CHST14	Q8NCH0	376 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	RABGGTA	Q92696	567 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	MRFAP1L1	Q96HT8	127 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	BOC	Q9BWV1	1114 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	GPR87	Q9BY21	358 aa		4.82	□□□□□ -1.64
CNOT2-233	ENST00000551710	GOLGA6L22	H0YM25	854 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	TRAF5	O00463	557 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	APP	P05067	770 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	JMJD7	P0C870	316 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	SLC9A1	P19634	815 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	IGFALS	P35858	605 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	IL12RB1	P42701	662 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	ANTXR2	P58335	489 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	ALDH6A1	Q02252	535 aa	Known RBP	4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	MAP3K12	Q12852	859 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	ELAVL1	Q15717	326 aa	Known RBP	4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	CSRP2	Q16527	193 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	CCDC142	Q17RM4	750 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	SOGA3	Q5TF21	947 aa		4.81	□□□□□ -1.64
CNOT2-233	ENST00000551710	MBNL2	Q5VZF2	373 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms