RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 TMEM117Q9H0C3 514 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 S1PR5Q9H228 398 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 CDH22Q9UJ99 828 aa20.23■□□□□ 0.83
PRPF40B-215ENST00000551418 WDR64B1ANS9 1081 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 OATP04181 439 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 EIF4BP23588 611 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 PRKCEQ02156 737 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 CBX2Q14781 532 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 MCTP2Q6DN12 878 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 LLGL2Q6P1M3 1020 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 KCNT2Q6UVM3 1135 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 SUSD6Q92537 303 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 SLC5A5Q92911 643 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 PHF7Q9BWX1 381 aaPredicted RBP20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 TCEAL9Q9UHQ7 104 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 CEP131Q9UPN4 1083 aa20.22■□□□□ 0.83
PRPF40B-215ENST00000551418 STBD1O95210 358 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 DARSP14868 501 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 IFNAR1P17181 557 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 LAG3P18627 525 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 GPC3P51654 580 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 PLCB3Q01970 1234 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 TARBP2Q15633 366 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 IER5LQ5T953 404 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 SYCE2Q6PIF2 218 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 TRIM67Q6ZTA4 783 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 FBXL16Q8N461 479 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 FAM167AQ96KS9 214 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 MAP7D2Q96T17 732 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 TCF25Q9BQ70 676 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 NRBP2Q9NSY0 501 aa20.21■□□□□ 0.83
PRPF40B-215ENST00000551418 TMEM221A6NGB7 291 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 M0R296 226 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 GAS7O60861 476 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 TDP2O95551 362 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 ATF7P17544 494 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 TECP42680 631 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 MRE11P49959 708 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 ZXDAP98168 799 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 ZNF598Q86UK7 904 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 CEP89Q96ST8 783 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 PHOX2BQ99453 314 aa20.2■□□□□ 0.82
PRPF40B-215ENST00000551418 NT5C1B-RDH14C9J2C7 533 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 DTNBO60941 627 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 PSMD10O75832 226 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 ZSCAN20P17040 1043 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 SP100P23497 879 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 TMOD1P28289 359 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 USP11P51784 963 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 NLRP5P59047 1200 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 TOB2Q14106 344 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 LRCH2Q5VUJ6 765 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 ANKRD54Q6NXT1 300 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 HELQQ8TDG4 1101 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 TBCKQ8TEA7 893 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 MFSD14AQ96MC6 490 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 ZNF558Q96NG5 402 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 AIFM3Q96NN9 605 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 RIT2Q99578 217 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 ENTPD7Q9NQZ7 604 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 RNF216Q9NWF9 866 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 LZTS1Q9Y250 596 aa20.19■□□□□ 0.82
PRPF40B-215ENST00000551418 EVCP57679 992 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 LONRF3Q496Y0 759 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 MTERF2Q49AM1 385 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 PDE12Q6L8Q7 609 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 TMEM184AQ6ZMB5 413 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 PRSS33Q8NF86 280 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 CCDC148Q8NFR7 591 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 PBXIP1Q96AQ6 731 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 CDCA3Q99618 268 aaPredicted RBP20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 TEKT3Q9BXF9 490 aa20.18■□□□□ 0.82
PRPF40B-215ENST00000551418 MYO10Q9HD67 2058 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 A0A0U1RQF3 1178 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 TBC1D8BQ0IIM8 1120 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 NPY5RQ15761 445 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 B3GNT9Q6UX72 402 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 TMC7Q7Z402 723 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 BMP8AQ7Z5Y6 402 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 ABI1Q8IZP0 508 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 SLC39A11Q8N1S5 342 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 LRRC43Q8N309 656 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 FEZF2Q8TBJ5 459 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 NLRP7Q8WX94 980 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 SCLT1Q96NL6 688 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 SPG21Q9NZD8 308 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 PUF60Q9UHX1 559 aaKnown RBP20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 ZDBF2Q9HCK1 2354 aa20.17■□□□□ 0.82
PRPF40B-215ENST00000551418 A0A087WZ62 844 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 MEIS3P2A8K0S8 358 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 M0R2N6 131 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 JAK3P52333 1124 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 KANK3Q6NY19 840 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 MIER3Q7Z3K6 550 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 TMEM173Q86WV6 379 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms