RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 DGAT1O75907 488 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 BMP15O95972 392 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 DARSP14868 501 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 EIF4BP23588 611 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 RARRES1P49788 294 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 ARL6IP4Q66PJ3 421 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 DTHD1Q6ZMT9 781 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 TMCO2Q7Z6W1 182 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 TCP11Q8WWU5 503 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 NLRP7Q8WX94 980 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 NACC1Q96RE7 527 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 INSL6Q9Y581 213 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 MICAL3Q7RTP6 2002 aa17.2■□□□□ 0.34
PRPF40B-211ENST00000551063 ZBTB39O15060 712 aa17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 PSPC1Q8WXF1 523 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 MTRQ99707 1265 aa17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 GCOM2Q9BZD3 368 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 ATP6V0A4Q9HBG4 840 aa17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 C1orf112Q9NSG2 853 aa17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 DBR1Q9UK59 544 aaKnown RBP17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 COL4A3BPQ9Y5P4 624 aa17.19■□□□□ 0.34
PRPF40B-211ENST00000551063 COL4A6Q14031 1691 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 LCHNA4D1U4 455 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 CCT6AP40227 531 aaKnown RBP17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 TAP1Q03518 808 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 RESTQ13127 1097 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 FAM117BQ6P1L5 589 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 POTEGQ6S5H5 508 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 RHPN2Q8IUC4 686 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 SNX29Q8TEQ0 813 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 YME1L1Q96TA2 773 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 XPNPEP1Q9NQW7 623 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 MTMR6Q9Y217 621 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 CDH23Q9H251 3354 aa17.18■□□□□ 0.34
PRPF40B-211ENST00000551063 A0A087WZ62 844 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 ASAP2O43150 1006 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 STX6O43752 255 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 ARHGEF15O94989 841 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 PDIA4P13667 645 aaKnown RBP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 IGFBP4P22692 258 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 IL17AQ16552 155 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 KRT79Q5XKE5 535 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 PPM1EQ8WY54 764 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 ZNF668Q96K58 619 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 NLRP4Q96MN2 994 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 FDXACB1Q9BRP7 624 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 RGS18Q9NS28 235 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 BMP2KQ9NSY1 1161 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 UNC80Q8N2C7 3258 aa17.17■□□□□ 0.34
PRPF40B-211ENST00000551063 DENND3A2RUS2 1198 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 LINC01553A4QN01 128 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 UPP2O95045 317 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 STAG3L1P0CL83 205 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 DSC3Q14574 896 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 MXD4Q14582 209 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 SLC24A5Q71RS6 500 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 MCPH1Q8NEM0 835 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 ADAM2Q99965 735 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 ZSCAN16Q9H4T2 348 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 RC3H2Q9HBD1 1191 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 EVPLQ92817 2033 aa17.16■□□□□ 0.34
PRPF40B-211ENST00000551063 PTPRSQ13332 1948 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 MGEA5O60502 916 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 USO1O60763 962 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 LAMTOR4Q0VGL1 99 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 ADGRE1Q14246 886 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 SRGAP1Q7Z6B7 1085 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 KCTD17Q8N5Z5 321 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 AK8Q96MA6 479 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 TGS1Q96RS0 853 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 IFT122Q9HBG6 1241 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 ADGRA3Q8IWK6 1321 aa17.15■□□□□ 0.34
PRPF40B-211ENST00000551063 ARHGEF35A5YM69 484 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 VWA3AA6NCI4 1184 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 C9IYK1 514 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 SLC26A4O43511 780 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 ZSCAN20P17040 1043 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 ARL2P36404 184 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 ERVK-21P61565 698 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 POU5F1BQ06416 359 aa17.14■□□□□ 0.33
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