RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 NBPF7P0C2Y1 421 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-206ENST00000550987 GJA4P35212 333 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 GPR3P46089 330 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 HK2P52789 917 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 CHRNEQ04844 493 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 ADCY1Q08828 1119 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 HSF5Q4G112 596 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-206ENST00000550987 TMEM240Q5SV17 173 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 NME9Q86XW9 330 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 ZDHHC13Q8IUH4 622 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 TRIM48Q8IWZ4 208 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 C16orf71Q8IYS4 520 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-206ENST00000550987 STK11IPQ8N1F8 1099 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 OXR1Q8N573 874 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 ANKS4BQ8N8V4 417 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 RTF1Q92541 710 aaKnown RBP6.75□□□□□ -1.33
CPSF6-206ENST00000550987 DLG3Q92796 817 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 ERCC4Q92889 916 aaPredicted RBP6.75□□□□□ -1.33
CPSF6-206ENST00000550987 ALPK1Q96QP1 1244 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 G6PC3Q9BUM1 346 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 ANO3Q9BYT9 981 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 AP5M1Q9H0R1 490 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 COMMD10Q9Y6G5 202 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 LAMC1P11047 1609 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 PREX2Q70Z35 1606 aa6.75□□□□□ -1.33
CPSF6-206ENST00000550987 BAHCC1Q9P281 2608 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 LCHNA4D1U4 455 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PRAMEF25A6NGN4 478 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 TRIM75PA6NK02 468 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 FZD9O00144 591 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA12O60330 932 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 BUB1BO60566 1050 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-206ENST00000550987 ZGLP1P0C6A0 271 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 CD96P40200 585 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 KRT85P78386 507 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 CYP4F8P98187 520 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 MVKQ03426 396 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 TUSC3Q13454 348 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PDCD1Q15116 288 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 VPS72Q15906 364 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 RALGPS1Q5JS13 557 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 FSTL4Q6MZW2 842 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 TIGD7Q6NT04 549 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-206ENST00000550987 GGT6Q6P531 493 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.74□□□□□ -1.33
CPSF6-206ENST00000550987 ZMAT4Q9H898 229 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 MYOTQ9UBF9 498 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 SAP30BPQ9UHR5 308 aaKnown RBP6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA9Q9Y5G4 932 aaKnown RBP6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA8Q9Y5G5 932 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA7Q9Y5G6 932 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA6Q9Y5G7 932 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA3Q9Y5H0 932 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHGA2Q9Y5H1 932 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 LAMB4A4D0S4 1761 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 PLCH1Q4KWH8 1693 aa6.74□□□□□ -1.33
CPSF6-206ENST00000550987 CHD2O14647 1828 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 PRR19A6NJB7 356 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 FOXP2O15409 715 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 EIF3JO75822 258 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 APOL3O95236 402 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 PTPN1P18031 435 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 IFIT1BQ5T764 474 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 DCP2Q8IU60 420 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 SMC5Q8IY18 1101 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 CMTR2Q8IYT2 770 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 MIER2Q8N344 545 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 CCDC120Q96HB5 630 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 TEKT5Q96M29 485 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 NUP88Q99567 741 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 CCM2LQ9NUG4 571 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 BSDC1Q9NW68 430 aaPredicted RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 USP36Q9P275 1121 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 EBF1Q9UH73 591 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 TMEM59LQ9UK28 342 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 DBR1Q9UK59 544 aaKnown RBP6.73□□□□□ -1.33
CPSF6-206ENST00000550987 SLC5A6Q9Y289 635 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
CPSF6-206ENST00000550987 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 CACNA1GO43497 2377 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 FAM90A27PA6NNH2 459 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 ERC2O15083 957 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 ARL4AP40617 200 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 EPHA7Q15375 998 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 SEC23AQ15436 765 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 UGT8Q16880 541 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 TOR2AQ5JU69 321 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 ESRP1Q6NXG1 681 aaKnown RBP6.72□□□□□ -1.33
CPSF6-206ENST00000550987 ESPNLQ6ZVH7 1005 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 C7orf31Q8N865 590 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 SEC14L1Q92503 715 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 QRSL1Q9H0R6 528 aaKnown RBP6.72□□□□□ -1.33
CPSF6-206ENST00000550987 CSRNP2Q9H175 543 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 ACSL6Q9UKU0 697 aa6.72□□□□□ -1.33
CPSF6-206ENST00000550987 NWD2Q9ULI1 1742 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms