RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ZNF558Q96NG5 402 aa26.03■■□□□ 1.76
SMARCD1-209ENST00000550477 CWH43Q9H720 699 aa26.03■■□□□ 1.76
SMARCD1-209ENST00000550477 ENTPD7Q9NQZ7 604 aa26.03■■□□□ 1.76
SMARCD1-209ENST00000550477 MSH4O15457 936 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 GLP2RO95838 553 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 ATF7P17544 494 aaPredicted RBP26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 DNM2P50570 870 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 ERVFC1P60507 584 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 PRKCEQ02156 737 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 KCNT2Q6UVM3 1135 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 HFE2Q6ZVN8 426 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 LRRC71Q8N4P6 559 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 RDM1Q8NG50 284 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 NLRP7Q8WX94 980 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 AGXT2Q9BYV1 514 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 VPS54Q9P1Q0 977 aa26.02■■□□□ 1.76
SMARCD1-209ENST00000550477 LOC730098B7Z3J9 87 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 EOMESO95936 686 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 CCT2P78371 535 aaKnown RBP26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 SSRP1Q08945 709 aaKnown RBP26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 PLPP4Q5VZY2 271 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 RNF169Q8NCN4 708 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 CASD1Q96PB1 797 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 TCF25Q9BQ70 676 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 ADAMTS10Q9H324 1103 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 PCDHGC5Q9Y5F6 944 aa26.01■■□□□ 1.75
SMARCD1-209ENST00000550477 CARNS1A5YM72 827 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 CPLX1O14810 134 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 FSCN2O14926 492 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 CHMP2AO43633 222 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 GPC3P51654 580 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 NTRK3Q16288 839 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 CPLX2Q6PUV4 134 aaKnown RBP26■■□□□ 1.75
SMARCD1-209ENST00000550477 MIER3Q7Z3K6 550 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 TMC7Q7Z402 723 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 ALYREFQ86V81 257 aaKnown RBP26■■□□□ 1.75
SMARCD1-209ENST00000550477 ECHDC2Q86YB7 292 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 RSPH1Q8WYR4 309 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 LENG9Q96B70 501 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 RPGRIP1Q96KN7 1286 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 MRPL9Q9BYD2 267 aaKnown RBP26■■□□□ 1.75
SMARCD1-209ENST00000550477 GCOM2Q9BZD3 368 aaPredicted RBP26■■□□□ 1.75
SMARCD1-209ENST00000550477 INO80BQ9C086 356 aaPredicted RBP26■■□□□ 1.75
SMARCD1-209ENST00000550477 SPG21Q9NZD8 308 aa26■■□□□ 1.75
SMARCD1-209ENST00000550477 A0A0U1RQF3 1178 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 ADAMTS3O15072 1205 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 DARSP14868 501 aaKnown RBP25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 PDIA3P30101 505 aaKnown RBP25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 CBX2Q14781 532 aaPredicted RBP25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 TMEM184AQ6ZMB5 413 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 BMP8AQ7Z5Y6 402 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 LINC01465Q8N7H1 131 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 TBCKQ8TEA7 893 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 SLC5A5Q92911 643 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 FBXL18Q96ME1 805 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 PRRX2Q99811 253 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 CHST12Q9NRB3 414 aa25.99■■□□□ 1.75
SMARCD1-209ENST00000550477 WDR81Q562E7 1941 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 ZNF862O60290 1169 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 HOXB8P17481 243 aaPredicted RBP25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 TECP42680 631 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 ALDH7A1P49419 539 aaKnown RBP25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 EVCP57679 992 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 Q4G0T1 1027 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 XKR3Q5GH77 459 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 TRIM67Q6ZTA4 783 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 SUGP1Q8IWZ8 645 aaKnown RBP25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 FAM177A1Q8N128 213 aaPredicted RBP25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 TMEM87AQ8NBN3 555 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 PBXIP1Q96AQ6 731 aa25.98■■□□□ 1.75
SMARCD1-209ENST00000550477 SKIP12755 728 aa25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 GALNT17Q6IS24 598 aa25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 JPH2Q9BR39 696 aaPredicted RBP25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 UNC45AQ9H3U1 944 aa25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 HCSTQ9UBK5 93 aa25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 SEPT9Q9UHD8 586 aaPredicted RBP25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 PCDHA4Q9UN74 947 aa25.97■■□□□ 1.75
SMARCD1-209ENST00000550477 TMEM221A6NGB7 291 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 M0R296 226 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 EPB41L2O43491 1005 aaKnown RBP25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 SFPQP23246 707 aaKnown RBP eCLIP25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 ZXDAP98168 799 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 SMC1AQ14683 1233 aaKnown RBP25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 TPRNQ4KMQ1 711 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 ANKRD54Q6NXT1 300 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 LRRC55Q6ZSA7 311 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 RUFY3Q7L099 469 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 CASP10Q92851 521 aa25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 ZNF668Q96K58 619 aaPredicted RBP25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 NIFKQ9BYG3 293 aaKnown RBP25.96■■□□□ 1.75
SMARCD1-209ENST00000550477 DEXIO95424 95 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 NHLH1Q02575 133 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 MTERF2Q49AM1 385 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 CES5AQ6NT32 575 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 SUSD6Q92537 303 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 NCOA5Q9HCD5 579 aaKnown RBP25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 CYP46A1Q9Y6A2 500 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 PIEZO1Q92508 2521 aa25.95■■□□□ 1.74
SMARCD1-209ENST00000550477 DKC1O60832 514 aaKnown RBP eCLIP25.94■■□□□ 1.74
SMARCD1-209ENST00000550477 PSMD10O75832 226 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms