RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CLDND1Q9NY35 253 aa12.22□□□□□ -0.45
VTI1BP3-201ENST00000550220 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
VTI1BP3-201ENST00000550220 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
VTI1BP3-201ENST00000550220 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
VTI1BP3-201ENST00000550220 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
VTI1BP3-201ENST00000550220 SIP14410 1827 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 IGKV6-21A0A0C4DH24 114 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 MGEA5O60502 916 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 CCNT1O60563 726 aaKnown RBP12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 MAFO75444 373 aaPredicted RBP12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 ITGB1P05556 798 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 LAG3P18627 525 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 KRT2P35908 639 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 AK2P54819 239 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 UGCGQ16739 394 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 PIK3AP1Q6ZUJ8 805 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 OTUD6AQ7L8S5 288 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 GJD3Q8N144 294 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 LRRC71Q8N4P6 559 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 POF1BQ8WVV4 589 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 LZTS1Q9Y250 596 aa12.21□□□□□ -0.45
VTI1BP3-201ENST00000550220 BRWD1Q9NSI6 2320 aa12.21□□□□□ -0.46
VTI1BP3-201ENST00000550220 H3BQ06 376 aaPredicted RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 STBD1O95210 358 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 ALADP13716 330 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 IBSPP21815 317 aaPredicted RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 PPM1AP35813 382 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 KRT17Q04695 432 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 HYAL1Q12794 435 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 ADAM15Q13444 863 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 TRIM29Q14134 588 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 BMS1Q14692 1282 aaKnown RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 EPHA7Q15375 998 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 MTERF2Q49AM1 385 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 FAM102BQ5T8I3 360 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 MICAL1Q8TDZ2 1067 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 SLC7A3Q8WY07 619 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 GJA10Q969M2 543 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 PPP1R16BQ96T49 567 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 CDCA3Q99618 268 aaPredicted RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
VTI1BP3-201ENST00000550220 MUC3AQ02505 3323 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 RBAK-RBAKDNI3L0D1 243 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 ASAP2O43150 1006 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 SLC37A4O43826 429 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 CTDNEP1O95476 244 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 CENPBP07199 599 aaPredicted RBP12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 SRGAP2BP0DMP2 458 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 SSTR3P32745 418 aaPredicted RBP12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 RFC5P40937 340 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 NEK4P51957 841 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 PLCB3Q01970 1234 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 CAMK1Q14012 370 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 ME3Q16798 604 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 C4orf19Q8IY42 314 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 THNSL1Q8IYQ7 743 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 EFHBQ8N7U6 833 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 CEP89Q96ST8 783 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 POP1Q99575 1024 aaKnown RBP12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 TLE6Q9H808 572 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 NGRNQ9NPE2 291 aaKnown RBP12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 CYP26B1Q9NR63 512 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 TLR9Q9NR96 1032 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 VAV3Q9UKW4 847 aa12.19□□□□□ -0.46
VTI1BP3-201ENST00000550220 PI4K2BG5E9Z4 385 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 EML1O00423 815 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 FGF18O76093 207 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 FGFR1P11362 822 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 IL9P15248 144 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 COL9A1P20849 921 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 LTBRP36941 435 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 GATMP50440 423 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 RAB27AP51159 221 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 SAFBQ15424 915 aaKnown RBP eCLIP12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 SMAD2Q15796 467 aaKnown RBP12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 ANO5Q75V66 913 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 ADHFE1Q8IWW8 467 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 COLGALT1Q8NBJ5 622 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 HAS1Q92839 578 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 CEP170P1Q96L14 293 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 ZNF558Q96NG5 402 aa12.18□□□□□ -0.46
VTI1BP3-201ENST00000550220 IGFLR1Q9H665 355 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms