RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PLD2O14939 933 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 DNAJC8O75937 253 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-210ENST00000547654 MYCLP1P12525 358 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-210ENST00000547654 NOLC1Q14978 699 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCAF11-210ENST00000547654 BTBD8Q5XKL5 378 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 CREB3L3Q68CJ9 461 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 MAMDC4Q6UXC1 1216 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 Q6ZSN1 163 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 NIM1KQ8IY84 436 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 NLGN4XQ8N0W4 816 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 ZNF808Q8N4W9 903 aaPredicted RBP5.61□□□□□ -1.51
SCAF11-210ENST00000547654 IL17DQ8TAD2 202 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 CACTINQ8WUQ7 758 aaKnown RBP5.61□□□□□ -1.51
SCAF11-210ENST00000547654 NDOR1Q9UHB4 597 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
SCAF11-210ENST00000547654 EID1Q9Y6B2 187 aa5.61□□□□□ -1.51
SCAF11-210ENST00000547654 KCNK3O14649 394 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 ARHGAP6O43182 974 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 PPFIA2O75334 1257 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 EIF3JO75822 258 aaKnown RBP5.6□□□□□ -1.51
SCAF11-210ENST00000547654 SRGAP2CP0DJJ0 459 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 TGM1P22735 817 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 SDHAP31040 664 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 STAT3P40763 770 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-210ENST00000547654 KCNQ1P51787 676 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 HERVK_113P62684 666 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 HHEXQ03014 270 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 TUBA3CQ13748 450 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 KANK2Q63ZY3 851 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 TUBA3EQ6PEY2 450 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 BCL6BQ8N143 479 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-210ENST00000547654 ZNF483Q8TF39 744 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-210ENST00000547654 NINJ1Q92982 152 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 FOXRED1Q96CU9 486 aaPredicted RBP5.6□□□□□ -1.51
SCAF11-210ENST00000547654 C8orf48Q96LL4 319 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 CAAP1Q9H8G2 361 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 ATP23Q9Y6H3 246 aa5.6□□□□□ -1.51
SCAF11-210ENST00000547654 TRAF5O00463 557 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 RFPL3O75679 317 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 RAPGEF3O95398 923 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 NAT1P18440 290 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 HIBADHP31937 336 aaKnown RBP5.59□□□□□ -1.51
SCAF11-210ENST00000547654 MC4RP32245 332 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 MSX2P35548 267 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-210ENST00000547654 ADCY8P40145 1251 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 EVA1CP58658 441 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 NANOS3P60323 173 aaKnown RBP5.59□□□□□ -1.51
SCAF11-210ENST00000547654 C21orf62-AS1Q17RA5 79 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 FNDC3BQ53EP0 1204 aaKnown RBP5.59□□□□□ -1.51
SCAF11-210ENST00000547654 BRDTQ58F21 947 aaPredicted RBP5.59□□□□□ -1.51
SCAF11-210ENST00000547654 CATSPEREQ5SY80 951 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 ZNF575Q86XF7 245 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 WDR75Q8IWA0 830 aaKnown RBP5.59□□□□□ -1.51
SCAF11-210ENST00000547654 WNK4Q96J92 1243 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 MSL2Q9HCI7 577 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 TLR9Q9NR96 1032 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 RIC8BQ9NVN3 520 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 SFMBT1Q9UHJ3 866 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 FBXO10Q9UK96 956 aa5.59□□□□□ -1.51
SCAF11-210ENST00000547654 MATN2O00339 956 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 PLIN1O60240 522 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 MAFO75444 373 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-210ENST00000547654 NPTXRO95502 500 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 SDSP20132 328 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 MAKP20794 623 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 GJA4P35212 333 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 IL13RA1P78552 427 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 DUSP8Q13202 625 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 NFYCQ13952 458 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 CRY1Q16526 586 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 CCSAPQ6IQ19 270 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-210ENST00000547654 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 OTOP2Q7RTS6 562 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 THNSL2Q86YJ6 484 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 ASB15Q8WXK1 588 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 PMM1Q92871 262 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 ORAI3Q9BRQ5 295 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 ZDHHC5Q9C0B5 715 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 MMRN2Q9H8L6 949 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 CATSPERZQ9NTU4 200 aa5.58□□□□□ -1.52
SCAF11-210ENST00000547654 AURKAIP1Q9NWT8 199 aaPredicted RBP5.58□□□□□ -1.52
SCAF11-210ENST00000547654 REXO2Q9Y3B8 237 aaKnown RBP5.58□□□□□ -1.52
SCAF11-210ENST00000547654 PLSCR1O15162 318 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 PDE8AO60658 829 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 CPEP16870 476 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 MEOX1P50221 254 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 EPHB1P54762 984 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 FAM50AQ14320 339 aaKnown RBP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 TMEM177Q53S58 311 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 DDX42Q86XP3 938 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 ZC3H7AQ8IWR0 971 aaKnown RBP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 DNAJC10Q8IXB1 793 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 SMC5Q8IY18 1101 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 CISD2Q8N5K1 135 aaKnown RBP5.57□□□□□ -1.52
SCAF11-210ENST00000547654 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 WDR48Q8TAF3 677 aa5.57□□□□□ -1.52
SCAF11-210ENST00000547654 MAGEB10Q96LZ2 347 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms