RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
RAB5C-204ENST00000547517 TUFT1Q9NNX1 390 aa13.2□□□□□ -0.3
RAB5C-204ENST00000547517 COL4A4P53420 1690 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 A0A087WWV3 80 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 A0A087WZ62 844 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 DENND3A2RUS2 1198 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 LAD1O00515 517 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 ENPP3O14638 875 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 MGEA5O60502 916 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 SPATA31C1P0DKV0 1188 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 FGFR4P22455 802 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 RARRES1P49788 294 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 HTRA4P83105 476 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 BRAPQ7Z569 592 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 RTN4RL1Q86UN2 441 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 EXOC8Q8IYI6 725 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 ZNF710Q8N1W2 664 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 ARNTL2Q8WYA1 636 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 MTRQ99707 1265 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 FDXACB1Q9BRP7 624 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 POLR3CQ9BUI4 534 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 GCOM2Q9BZD3 368 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-204ENST00000547517 ATP6V0A4Q9HBG4 840 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 ANKEF1Q9NU02 776 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 COL6A3P12111 3177 aa13.19□□□□□ -0.3
RAB5C-204ENST00000547517 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 LINC01553A4QN01 128 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 EPOPA6NHQ4 379 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 PP2D1A8MPX8 630 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
RAB5C-204ENST00000547517 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
RAB5C-204ENST00000547517 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
RAB5C-204ENST00000547517 SYT1P21579 422 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 RPA1P27694 616 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 CCT6AP40227 531 aaKnown RBP13.18□□□□□ -0.3
RAB5C-204ENST00000547517 PRPHP41219 470 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 ATP2C1P98194 919 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-204ENST00000547517 IL17AQ16552 155 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 ZNF410Q86VK4 478 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 SNX29Q8TEQ0 813 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 TCP11Q8WWU5 503 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 ADAM2Q99965 735 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 XPNPEP1Q9NQW7 623 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 EYSQ5T1H1 3165 aa13.18□□□□□ -0.3
RAB5C-204ENST00000547517 ADGRA3Q8IWK6 1321 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 RFXAPO00287 272 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 DGAT1O75907 488 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
RAB5C-204ENST00000547517 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAB5C-204ENST00000547517 SARSP49591 514 aaKnown RBP13.17□□□□□ -0.3
RAB5C-204ENST00000547517 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 RESTQ13127 1097 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-204ENST00000547517 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
RAB5C-204ENST00000547517 NACC1Q96RE7 527 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 TGS1Q96RS0 853 aaKnown RBP13.17□□□□□ -0.3
RAB5C-204ENST00000547517 C1orf112Q9NSG2 853 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
RAB5C-204ENST00000547517 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 VWA3AA6NCI4 1184 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 STAG3L1P0CL83 205 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 SRGAP2CP0DJJ0 459 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 IGFBP4P22692 258 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 CDC25AP30304 524 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 GATMP50440 423 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 ECM1Q16610 540 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 KRT79Q5XKE5 535 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 MAEAQ7L5Y9 396 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 RNF149Q8NC42 400 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-204ENST00000547517 GDPD5Q8WTR4 605 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 C17orf80Q9BSJ5 609 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
RAB5C-204ENST00000547517 RC3H2Q9HBD1 1191 aaKnown RBP13.16□□□□□ -0.3
RAB5C-204ENST00000547517 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 DDX19AQ9NUU7 478 aaKnown RBP13.16□□□□□ -0.3
RAB5C-204ENST00000547517 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
RAB5C-204ENST00000547517 MTMR6Q9Y217 621 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 TTC3P53804 2025 aa13.16□□□□□ -0.3
RAB5C-204ENST00000547517 C9IYK1 514 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 STX6O43752 255 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 DGKIO75912 1065 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 XRCC6P12956 609 aaKnown RBP eCLIP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms