RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 GRXCR1A8MXD5 290 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 TREHO43280 583 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 ACTR2P61160 394 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 TBX2Q13207 712 aaPredicted RBP19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 PDIA5Q14554 519 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 SPECC1LQ69YQ0 1117 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 ARMCX5Q6P1M9 558 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 OTOP2Q7RTS6 562 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 DEFB128Q7Z7B8 93 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 GRAMD1CQ8IYS0 662 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 DEFB123Q8N688 67 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 AFAP1L1Q8TED9 768 aa19.14■□□□□ 0.65
RBFOX1-207ENST00000547338 CHD7Q9P2D1 2997 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 C17orf102A2RUQ5 167 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 NBNO60934 754 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 ATG7O95352 703 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 FGBP02675 491 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 SELPP16109 830 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 STIM1Q13586 685 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 SYCP1Q15431 976 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 CDKAL1Q5VV42 579 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 NYAP1Q6ZVC0 841 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 LMBR1Q8WVP7 490 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 LRRC27Q9C0I9 530 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 TTYH1Q9H313 450 aaPredicted RBP19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 KBTBD4Q9NVX7 518 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 MTMR10Q9NXD2 777 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 GBF1Q92538 1859 aa19.13■□□□□ 0.65
RBFOX1-207ENST00000547338 PTPRSQ13332 1948 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 IGKV6D-21A0A0A0MT36 114 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 GOLGA6L9A6NEM1 432 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 RPN1P04843 607 aaKnown RBP19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 GCFC2P16383 781 aaKnown RBP19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 ZNF76P36508 570 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 ZNF618Q5T7W0 954 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 PPP4R3AQ6IN85 833 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 LRRC8DQ7L1W4 858 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 RETREG2Q8NC44 543 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 NOC3LQ8WTT2 800 aaKnown RBP19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 ATP6V0A1Q93050 837 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 OSBPL7Q9BZF2 842 aa19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 ZNF215Q9UL58 517 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-207ENST00000547338 IPO5O00410 1097 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 STX10O60499 249 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 CCNT1O60563 726 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 MARK3P27448 753 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 RFC2P35250 354 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 PBX2P40425 430 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 FXR2P51116 673 aaKnown RBP eCLIP19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 TMEM266Q2M3C6 531 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 PRR16Q569H4 304 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 MARCH8Q5T0T0 291 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 RPUSD2Q8IZ73 545 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 TBCKQ8TEA7 893 aa19.11■□□□□ 0.65
RBFOX1-207ENST00000547338 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ARHGAP6O43182 974 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ZSCAN12O43309 604 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CXCL10P02778 98 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 PFKMP08237 780 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ARID5BQ14865 1188 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 COBLL1Q53SF7 1204 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ABHD15Q6UXT9 468 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CABP7Q86V35 215 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CCDC155Q8N6L0 562 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 IGSF22Q8N9C0 903 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CALML4Q96GE6 196 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 GUCD1Q96NT3 240 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 NAA15Q9BXJ9 866 aaKnown RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 TMEM60Q9H2L4 133 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ERAP1Q9NZ08 941 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 SIP14410 1827 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 RRP9O43818 475 aaKnown RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 RHOBTB3O94955 611 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 USP11P51784 963 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 SETQ01105 290 aaPredicted RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 PAK1Q13153 545 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 LETM2Q2VYF4 491 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 RUFY4Q6ZNE9 571 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CCDC60Q8IWA6 550 aaPredicted RBP19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 RASSF8Q8NHQ8 419 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 GJA10Q969M2 543 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ZBTB10Q96DT7 871 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 CCDC51Q96ER9 411 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 MTMR9Q96QG7 549 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 MED15Q96RN5 788 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 C7orf25Q9BPX7 421 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 PBX4Q9BYU1 374 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 SMARCAD1Q9H4L7 1026 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 STK17AQ9UEE5 414 aa19.1■□□□□ 0.65
RBFOX1-207ENST00000547338 ITIH6Q6UXX5 1313 aa19.09■□□□□ 0.65
RBFOX1-207ENST00000547338 KAT6AQ92794 2004 aa19.09■□□□□ 0.65
RBFOX1-207ENST00000547338 MBLAC1A4D2B0 266 aaPredicted RBP19.09■□□□□ 0.65
RBFOX1-207ENST00000547338 MSH4O15457 936 aa19.09■□□□□ 0.65
RBFOX1-207ENST00000547338 TDP2O95551 362 aa19.09■□□□□ 0.65
RBFOX1-207ENST00000547338 PLCB4Q15147 1175 aa19.09■□□□□ 0.65
RBFOX1-207ENST00000547338 KIF18AQ8NI77 898 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms