RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 KIFAP3Q92845 792 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 CEP89Q96ST8 783 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 C11orf49Q9H6J7 331 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 POLD4Q9HCU8 107 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 PDLIM7Q9NR12 457 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 TBC1D7Q9P0N9 293 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 RWDD2AQ9UIY3 292 aa18.67■□□□□ 0.58
ARFGAP1-220ENST00000547204 MYH11P35749 1972 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 SFI1A8K8P3 1242 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 KIF20AO95235 890 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 NCAPHQ15003 741 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 ODR4Q5SWX8 454 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 LHX8Q68G74 356 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 MYOCDQ8IZQ8 938 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 UPF3AQ9H1J1 476 aaKnown RBP18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 MRPL44Q9H9J2 332 aaKnown RBP18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 XPNPEP1Q9NQW7 623 aa18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 LARSQ9P2J5 1176 aaKnown RBP18.66■□□□□ 0.58
ARFGAP1-220ENST00000547204 H3BRB1 525 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 RARBP10826 455 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 PLS3P13797 630 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 GJA9P57773 515 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 TPM4P67936 248 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 LRRC41Q15345 812 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 FSCN1Q16658 493 aaKnown RBP18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 ZNF484Q5JVG2 852 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 EXOC8Q8IYI6 725 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 GLIS3Q8NEA6 775 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 FGFBP2Q9BYJ0 223 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 RNPEPQ9H4A4 650 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 TUT1Q9H6E5 874 aaKnown RBP18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 GPRC5CQ9NQ84 441 aa18.65■□□□□ 0.58
ARFGAP1-220ENST00000547204 COL1A2P08123 1366 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 ZBTB42B2RXF5 422 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 MAFO75444 373 aaPredicted RBP18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 F2P00734 622 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 MAPTP10636 758 aaKnown RBP18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 CCNE1P24864 410 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 STX17P56962 302 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 RTP1P59025 263 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 TBC1D8BQ0IIM8 1120 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 EPM2AIP1Q7L775 607 aaPredicted RBP18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 P2RX5Q93086 422 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 MED15Q96RN5 788 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 JPH2Q9BR39 696 aaPredicted RBP18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 C17orf75Q9HAS0 396 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 SPC25Q9HBM1 224 aa18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 DDX20Q9UHI6 824 aaKnown RBP18.64■□□□□ 0.57
ARFGAP1-220ENST00000547204 UBE4BO95155 1302 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 BICDL2A1A5D9 508 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 EIF3DO15371 548 aaKnown RBP eCLIP18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 GAS2O43903 313 aaKnown RBP18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 MSCO60682 206 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 KPNA6O60684 536 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 GCNT3O95395 438 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 MYL3P08590 195 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 C6orf222P0C671 652 aaPredicted RBP18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 CASP5P51878 434 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 NKX3-2P78367 333 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 BEX3Q00994 111 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 SLC17A8Q8NDX2 589 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 SCFD1Q8WVM8 642 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 POLR3FQ9H1D9 316 aaPredicted RBP18.63■□□□□ 0.57
ARFGAP1-220ENST00000547204 MYBP10242 640 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 INSRRP14616 1297 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 NMT1P30419 496 aaKnown RBP18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 PEX3P56589 373 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 DMP1Q13316 513 aaPredicted RBP18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 ALCAMQ13740 583 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 BMT2Q1RMZ1 405 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 CENPPQ6IPU0 288 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 ZNF720Q7Z2F6 126 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 C7orf61Q8IZ16 206 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 KAT2BQ92831 832 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 XPNPEP3Q9NQH7 507 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 NFE2L3Q9Y4A8 694 aa18.62■□□□□ 0.57
ARFGAP1-220ENST00000547204 IGKV6-21A0A0C4DH24 114 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 TRIM49BA6NDI0 452 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 MYADML2A6NDP7 307 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 K7ENM7 598 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 ZEB2O60315 1214 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 COL6A1P12109 1028 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 ARL2P36404 184 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 SMTNP53814 917 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 PPFIA1Q13136 1202 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 MFSD10Q14728 455 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 TPD52L1Q16890 204 aaPredicted RBP18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 TTI2Q6NXR4 508 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 FOXR2Q6PJQ5 311 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 ZNF507Q8TCN5 953 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 TRAPPC12Q8WVT3 735 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 TCP11Q8WWU5 503 aa18.61■□□□□ 0.57
ARFGAP1-220ENST00000547204 BSNDQ8WZ55 320 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms