RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CD52P31358 61 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 TXLNAP40222 546 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 KCNJ6P48051 423 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 GPC3P51654 580 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 PAK2Q13177 524 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 HYIQ5T013 277 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 MAEAQ7L5Y9 396 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 KCNG4Q8TDN1 519 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 APBB2Q92870 758 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 NLRP4Q96MN2 994 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 PNMA5Q96PV4 448 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 GCOM2Q9BZD3 368 aaPredicted RBP18.71■□□□□ 0.59
LTBR-215ENST00000546296 CXXC1Q9P0U4 656 aaPredicted RBP18.71■□□□□ 0.59
LTBR-215ENST00000546296 COL4A3BPQ9Y5P4 624 aa18.71■□□□□ 0.59
LTBR-215ENST00000546296 RBAK-RBAKDNI3L0D1 243 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 ASAP2O43150 1006 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 EFCAB14O75071 495 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 PPP6R2O75170 966 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 RPS6KA5O75582 802 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 SRGAP2CP0DJJ0 459 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 LAMTOR4Q0VGL1 99 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 NFX1Q12986 1120 aaKnown RBP18.7■□□□□ 0.58
LTBR-215ENST00000546296 GRB10Q13322 594 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 ODR4Q5SWX8 454 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 FAM102BQ5T8I3 360 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 KSR1Q8IVT5 923 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 KCTD17Q8N5Z5 321 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 MCPH1Q8NEM0 835 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 EPSTI1Q96J88 318 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 AGO3Q9H9G7 860 aaKnown RBP18.7■□□□□ 0.58
LTBR-215ENST00000546296 XPNPEP1Q9NQW7 623 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 PADI3Q9ULW8 664 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 NOC2LQ9Y3T9 749 aaKnown RBP18.7■□□□□ 0.58
LTBR-215ENST00000546296 WDR81Q562E7 1941 aa18.7■□□□□ 0.58
LTBR-215ENST00000546296 A0A087WZ62 844 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 GPR182O15218 404 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 CYP11B2P19099 503 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 EIF4BP23588 611 aaKnown RBP18.69■□□□□ 0.58
LTBR-215ENST00000546296 ME1P48163 572 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 KRT85P78386 507 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 MXD4Q14582 209 aaPredicted RBP18.69■□□□□ 0.58
LTBR-215ENST00000546296 KARSQ15046 597 aaKnown RBP18.69■□□□□ 0.58
LTBR-215ENST00000546296 TMEM119Q4V9L6 283 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 RASIP1Q5U651 963 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 KCNK18Q7Z418 384 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 ZNF410Q86VK4 478 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 SYMPKQ92797 1274 aaKnown RBP18.69■□□□□ 0.58
LTBR-215ENST00000546296 FDXACB1Q9BRP7 624 aaPredicted RBP18.69■□□□□ 0.58
LTBR-215ENST00000546296 CCSER1Q9C0I3 900 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 TANC1Q9C0D5 1861 aa18.69■□□□□ 0.58
LTBR-215ENST00000546296 SCN5AQ14524 2016 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 CUTAO60888 179 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 PLA2G4BP0C869 781 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 DARSP14868 501 aaKnown RBP18.68■□□□□ 0.58
LTBR-215ENST00000546296 TFDP1Q14186 410 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 LRIT3Q3SXY7 679 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 USP49Q70CQ1 688 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 TMEM40Q8WWA1 233 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 INO80BQ9C086 356 aaPredicted RBP18.68■□□□□ 0.58
LTBR-215ENST00000546296 POLR3FQ9H1D9 316 aaPredicted RBP18.68■□□□□ 0.58
LTBR-215ENST00000546296 RCOR1Q9UKL0 485 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 ST3GAL5Q9UNP4 418 aa18.68■□□□□ 0.58
LTBR-215ENST00000546296 RANBP2P49792 3224 aaKnown RBP18.67■□□□□ 0.58
LTBR-215ENST00000546296 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.67■□□□□ 0.58
LTBR-215ENST00000546296 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.67■□□□□ 0.58
LTBR-215ENST00000546296 AMHP03971 560 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 ATP2A2P16615 1042 aaKnown RBP18.67■□□□□ 0.58
LTBR-215ENST00000546296 PLCG1P19174 1290 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 DDIT3P35638 169 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 ARL2P36404 184 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
LTBR-215ENST00000546296 SPATA32Q96LK8 384 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 FTHL17Q9BXU8 183 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 PANK2Q9BZ23 570 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 ERVK-5Q9HDB9 667 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 GPRC5CQ9NQ84 441 aa18.67■□□□□ 0.58
LTBR-215ENST00000546296 CSDE1O75534 798 aaKnown RBP18.66■□□□□ 0.58
LTBR-215ENST00000546296 DHX8Q14562 1220 aaKnown RBP18.66■□□□□ 0.58
LTBR-215ENST00000546296 RRAGBQ5VZM2 374 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.66■□□□□ 0.58
LTBR-215ENST00000546296 FAM228AQ86W67 206 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 SYT2Q8N9I0 419 aaPredicted RBP18.66■□□□□ 0.58
LTBR-215ENST00000546296 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 PHOSPHO2Q8TCD6 241 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 ASAP3Q8TDY4 903 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 CHAMP1Q96JM3 812 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 SLC9A7Q96T83 725 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 EVPLQ92817 2033 aa18.66■□□□□ 0.58
LTBR-215ENST00000546296 DENND3A2RUS2 1198 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 GRXCR1A8MXD5 290 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 ENPP3O14638 875 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 FGFR4P22455 802 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 GLRA2P23416 452 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 PHKA2P46019 1235 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 RINT1Q6NUQ1 792 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 CCDC73Q6ZRK6 1079 aa18.65■□□□□ 0.58
LTBR-215ENST00000546296 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
LTBR-215ENST00000546296 KIFAP3Q92845 792 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms