RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 PARP4Q9UKK3 1724 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-202ENST00000545908 ESYT2A0FGR8 921 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 RPS6KA5O75582 802 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 EPHB1P54762 984 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 LMNB2Q03252 620 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SNX1Q13596 522 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 VEPH1Q14D04 833 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 CEP55Q53EZ4 464 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 ARHGEF18Q6ZSZ5 1173 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 C11orf57Q6ZUT1 292 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SEL1LQ9UBV2 794 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 GTF2A1P52655 376 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 PPP2R5EQ16537 467 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 CCDC13Q8IYE1 715 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 GPC2Q8N158 579 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 PRPF31Q8WWY3 499 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 C10orf76Q5T2E6 689 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 BBOF1Q8ND07 529 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 POLD4Q9HCU8 107 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 HPCAL4Q9UM19 191 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 ADORA2BP29275 332 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 GRIK1P39086 918 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 KRT33BQ14525 404 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 MXD4Q14582 209 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 KNOP1Q1ED39 458 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 PASD1Q8IV76 773 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 NDUFAF2Q8N183 169 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SAAL1Q96ER3 474 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 TIPINQ9BVW5 301 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 CALN1Q9BXU9 219 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 KNDC1Q76NI1 1749 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 EFNA5P52803 228 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 USP50Q70EL3 339 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 TRPC7Q9HCX4 862 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 RBAKQ9NYW8 714 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 IKBKBO14920 756 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 CIB2O75838 187 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 NAA35Q5VZE5 725 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SGMS1Q86VZ5 419 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SPATA2LQ8IUW3 424 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.73□□□□□ -0.857e-6■■■■■ 27.5
MTHFD1-202ENST00000545908 DPH5Q9H2P9 285 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 EPB41L4AQ9HCS5 686 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 SAMSN1Q9NSI8 373 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
MTHFD1-202ENST00000545908 M0QYV0 167 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 TBXAS1P24557 533 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 GUCY1A2P33402 732 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 GUCY2FP51841 1108 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 WHAMMP3Q1A5X7 153 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 FAM117BQ6P1L5 589 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 RAPH1Q70E73 1250 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 TSC1Q92574 1164 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 CPA4Q9UI42 421 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 AGO2Q9UKV8 859 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 LAMC2Q13753 1193 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 LRRC8AQ8IWT6 810 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 CDKL2Q92772 493 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 STXBP3O00186 592 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 PLSCR1O15162 318 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 GCLCP48506 637 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 UBE4BO95155 1302 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 AFDNP55196 1824 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 EYA4O95677 639 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 GCLMP48507 274 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 PDS5AQ29RF7 1337 aaKnown RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 NBPF12Q5TAG4 269 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 EFCAB13Q8IY85 973 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 C17orf53Q8N3J3 647 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 NDST4Q9H3R1 872 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 NHEJ1Q9H9Q4 299 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 ADGRB2O60241 1585 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 MANSC4A6NHS7 340 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 ITGA4P13612 1032 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 NFKBIAP25963 317 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 RFX5P48382 616 aaPredicted RBP9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 EHHADHQ08426 723 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 MXRA8Q9BRK3 442 aa9.72□□□□□ -0.85
MTHFD1-202ENST00000545908 ADM5C9JUS6 153 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 THOC5Q13769 683 aaKnown RBP9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 RUFY4Q6ZNE9 571 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 PROM2Q8N271 834 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 PPP4R1Q8TF05 950 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 DPF3Q92784 378 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 PDHXO00330 501 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 ICAM1P05362 532 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 PRR29P0C7W0 189 aa9.71□□□□□ -0.85
MTHFD1-202ENST00000545908 RALAP11233 206 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms