RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 FCHSD1Q86WN1 690 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 TRIM50Q86XT4 487 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 TMEM192Q8IY95 271 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 LEO1Q8WVC0 666 aaPredicted RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 LMBR1Q8WVP7 490 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 AK8Q96MA6 479 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 MBOAT7Q96N66 472 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 USP28Q96RU2 1077 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 IFIH1Q9BYX4 1025 aaKnown RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 NSUN3Q9H649 340 aaKnown RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 LMBRD1Q9NUN5 540 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 SETD4Q9NVD3 440 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 ZNF215Q9UL58 517 aaPredicted RBP7.4□□□□□ -1.22
CDCA3-209ENST00000544610 KCNJ14Q9UNX9 436 aa7.4□□□□□ -1.22
CDCA3-209ENST00000544610 WDFY4Q6ZS81 3184 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 RALGAPA2Q2PPJ7 1873 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 NRCAMQ92823 1304 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 C5orf67F2Z3F1 127 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 SPTLC2O15270 562 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 MAFGO15525 162 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 CUTAO60888 179 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 UPP2O95045 317 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 LINC00271P0C7V0 271 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 ALADP13716 330 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 CMA1P23946 247 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 TOB1P50616 345 aaPredicted RBP7.39□□□□□ -1.23
CDCA3-209ENST00000544610 ATP2C1P98194 919 aaPredicted RBP7.39□□□□□ -1.23
CDCA3-209ENST00000544610 GUCY1B3Q02153 619 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 ZP2Q05996 745 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 NR5A1Q13285 461 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 TTC38Q5R3I4 469 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 SYAP1Q96A49 352 aaPredicted RBP7.39□□□□□ -1.23
CDCA3-209ENST00000544610 CALR3Q96L12 384 aaKnown RBP7.39□□□□□ -1.23
CDCA3-209ENST00000544610 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 PRM3Q9NNZ6 103 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 PRKAG3Q9UGI9 489 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 USP25Q9UHP3 1055 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 FAM50BQ9Y247 325 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 TELO2Q9Y4R8 837 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 SRPRBQ9Y5M8 271 aaKnown RBP7.39□□□□□ -1.23
CDCA3-209ENST00000544610 MYO9BQ13459 2157 aa7.39□□□□□ -1.23
CDCA3-209ENST00000544610 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 ADGRA3Q8IWK6 1321 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 hCG_1642624A0A1W2PR95 340 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 GOLGA6L4A6NEF3 574 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 DCXO43602 365 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 NCK2O43639 380 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 LETM1O95202 739 aaPredicted RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CHRNA1P02708 482 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 RB1P06400 928 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CTNNB1P35222 781 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 LONP1P36776 959 aaKnown RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 LTBRP36941 435 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 ARHGAP4P98171 946 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 SETQ01105 290 aaPredicted RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 MGAT3Q09327 533 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 PDIA5Q14554 519 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 STK38Q15208 465 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 SF3A1Q15459 793 aaKnown RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CTC1Q2NKJ3 1217 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 Q4G0T1 1027 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 TAF2Q6P1X5 1199 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 PADI6Q6TGC4 694 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 PIK3AP1Q6ZUJ8 805 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 ADHFE1Q8IWW8 467 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 SLFN12Q8IYM2 578 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 FIBCD1Q8N539 461 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 TBCKQ8TEA7 893 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CLP1Q92989 425 aaKnown RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CCDC34Q96HJ3 373 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CDHR1Q96JP9 859 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 FAM20AQ96MK3 541 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 C11orf84Q9BUA3 381 aaPredicted RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 RAB34Q9BZG1 259 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 LMAN2LQ9H0V9 348 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 GZF1Q9H116 711 aaPredicted RBP7.38□□□□□ -1.23
CDCA3-209ENST00000544610 GDPD2Q9HCC8 539 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 GJB4Q9NTQ9 266 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 CLDND1Q9NY35 253 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 RWDD3Q9Y3V2 267 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 PCDHGA10Q9Y5H3 936 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 ADGRG1Q9Y653 693 aa7.38□□□□□ -1.23
CDCA3-209ENST00000544610 MYH7BA7E2Y1 1941 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 NCOR1O75376 2440 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 NLRC5Q86WI3 1866 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 MBLAC1A4D2B0 266 aaPredicted RBP7.37□□□□□ -1.23
CDCA3-209ENST00000544610 GRM6O15303 877 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 NEMFO60524 1076 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 PPFIA3O75145 1194 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 GHRP10912 638 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 KCNA2P16389 499 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 MUTP22033 750 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 TCF7P36402 384 aaPredicted RBP7.37□□□□□ -1.23
CDCA3-209ENST00000544610 BMPR1AP36894 532 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 ABL2P42684 1182 aa7.37□□□□□ -1.23
CDCA3-209ENST00000544610 SP4Q02446 784 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms