RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SMARCA1P28370 1054 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 USP14P54578 494 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 LLGL1Q15334 1064 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 LRRC41Q15345 812 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 EYA1Q99502 592 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 TRAF3IP3Q9Y228 551 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 GOLGA8MH3BSY2 632 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
PCDH9-204ENST00000544246 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
PCDH9-204ENST00000544246 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 IP6K1Q92551 441 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 SH3GL3Q99963 347 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
PCDH9-204ENST00000544246 THAP9Q9H5L6 903 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 SARS2Q9NP81 518 aaKnown RBP11.09□□□□□ -0.63
PCDH9-204ENST00000544246 NEMP1O14524 444 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 KRT75O95678 551 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 HOXB7P09629 217 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 SLC7A5Q01650 507 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 LUZP2Q86TE4 346 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 TADA2BQ86TJ2 420 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 FAM161BQ96MY7 647 aa11.09□□□□□ -0.63
PCDH9-204ENST00000544246 CFAP69A5D8W1 941 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 RASA4BC9J798 803 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 RASA4O43374 803 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 EIF4A3P38919 411 aaKnown RBP11.08□□□□□ -0.63
PCDH9-204ENST00000544246 CAPZA2P47755 286 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 RAB42Q8N4Z0 105 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 PBXIP1Q96AQ6 731 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 PCDHGB4Q9UN71 923 aa11.08□□□□□ -0.63
PCDH9-204ENST00000544246 UBXN8O00124 270 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CHUKO15111 745 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 UBXN2AP68543 259 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 STXBP2Q15833 593 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 ASPRV1Q53RT3 343 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 SRPK1Q96SB4 655 aaKnown RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PARD6BQ9BYG5 372 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 ADNPQ9H2P0 1102 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 ECT2Q9H8V3 914 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 EML4Q9HC35 981 aaKnown RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PKD2L2Q9NZM6 624 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 RWDD2AQ9UIY3 292 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 FBXO2Q9UK22 296 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PYCARDQ9ULZ3 195 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 MAP3K15Q6ZN16 1313 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 HDDC2Q7Z4H3 204 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CCNYL1Q8N7R7 359 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PDCD6IPQ8WUM4 868 aaKnown RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 ADCY9O60503 1353 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 SSH2Q76I76 1423 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 DIAPH2O60879 1101 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CTSWP56202 376 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 AP1B1Q10567 949 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CDC37Q16543 378 aaPredicted RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 RBM41Q96IZ5 413 aaKnown RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 SLITRK6Q9H5Y7 841 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 DTNBO60941 627 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PSAPP07602 524 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PCP11498 1178 aaKnown RBP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 OSTNP61366 133 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CAV1Q03135 178 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 C16orf72Q14CZ0 275 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 PODNQ7Z5L7 613 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 DDIASQ8IXT1 998 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 CCDC24Q8N4L8 307 aa11.08□□□□□ -0.64
PCDH9-204ENST00000544246 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.08□□□□□ -0.64
PCDH9-204ENST00000544246 SPDYE5A6NIY4 337 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 GOLGA8RI6L899 631 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 KCNA2P16389 499 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CACNB1Q02641 598 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CASP8Q14790 479 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 SPDYE7PQ495Y7 208 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 DTNBP1Q96EV8 351 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 TRIM54Q9BYV2 358 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 AFF4Q9UHB7 1163 aaKnown RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ADCY3O60266 1144 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 GUCA1CO95843 209 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 PSMA3P25788 255 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 MAGEA9P43362 315 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 MXI1P50539 228 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 SCNN1DP51172 638 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 POU5F1BQ06416 359 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CCDC15Q0P6D6 951 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ALCAMQ13740 583 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ANGPT1Q15389 498 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CCDC142Q17RM4 750 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 FAM182BQ5T319 152 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 RHOT2Q8IXI1 618 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 WDR48Q8TAF3 677 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 SDR42E1Q8WUS8 393 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CALR3Q96L12 384 aaKnown RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 EHD2Q9NZN4 543 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 A0A1W2PQ27 194 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms