RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CALML4Q96GE6 196 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
CD9-210ENST00000543916 PCDHA7Q9UN72 937 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
CD9-210ENST00000543916 MICAL3Q7RTP6 2002 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 FGBP02675 491 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 PLEKHG4Q58EX7 1191 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 PADI6Q6TGC4 694 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 RHPN2Q8IUC4 686 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 OSMRQ99650 979 aa16.79■□□□□ 0.28
CD9-210ENST00000543916 AGO3Q9H9G7 860 aaKnown RBP16.79■□□□□ 0.28
CD9-210ENST00000543916 A0A087X0B3 334 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 ME1P48163 572 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 CRYBB1P53674 252 aaPredicted RBP16.78■□□□□ 0.28
CD9-210ENST00000543916 CNKSR3Q6P9H4 555 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 SHC4Q6S5L8 630 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 TSHZ1Q6ZSZ6 1077 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 MAEAQ7L5Y9 396 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 TDHQ8IZJ6 230 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 KCTD17Q8N5Z5 321 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 DBF4BQ8NFT6 615 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 TCP11Q8WWU5 503 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 PRPF31Q8WWY3 499 aaKnown RBP16.78■□□□□ 0.28
CD9-210ENST00000543916 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
CD9-210ENST00000543916 RUSC1Q9BVN2 902 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 IFIH1Q9BYX4 1025 aaKnown RBP16.78■□□□□ 0.28
CD9-210ENST00000543916 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 BLOC1S4Q9NUP1 217 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
CD9-210ENST00000543916 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
CD9-210ENST00000543916 A0A087WZ62 844 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 PLA2G4BP0C869 781 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 CYP11B2P19099 503 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 CD52P31358 61 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 ARL2P36404 184 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 TXLNAP40222 546 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 SLC12A3P55017 1021 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 LAMTOR4Q0VGL1 99 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 RASIP1Q5U651 963 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 MCPH1Q8NEM0 835 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 ASAP3Q8TDY4 903 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 NLRP7Q8WX94 980 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 HERVK_113Q902F9 699 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 RNPC3Q96LT9 517 aaKnown RBP16.77■□□□□ 0.28
CD9-210ENST00000543916 NLRP4Q96MN2 994 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 FDXACB1Q9BRP7 624 aaPredicted RBP16.77■□□□□ 0.28
CD9-210ENST00000543916 POLR3FQ9H1D9 316 aaPredicted RBP16.77■□□□□ 0.28
CD9-210ENST00000543916 GDPD2Q9HCC8 539 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 CXXC1Q9P0U4 656 aaPredicted RBP16.77■□□□□ 0.28
CD9-210ENST00000543916 SQORQ9Y6N5 450 aa16.77■□□□□ 0.28
CD9-210ENST00000543916 RANBP2P49792 3224 aaKnown RBP16.77■□□□□ 0.27
CD9-210ENST00000543916 GBF1Q92538 1859 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
CD9-210ENST00000543916 ACTN1P12814 892 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 MCM6Q14566 821 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 FAM102BQ5T8I3 360 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 RINT1Q6NUQ1 792 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 C1orf186Q6ZWK4 172 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 SYT2Q8N9I0 419 aaPredicted RBP16.76■□□□□ 0.27
CD9-210ENST00000543916 USP38Q8NB14 1042 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 SEPT8Q92599 483 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 RAD54LQ92698 747 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 SCLT1Q96NL6 688 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 IPO9Q96P70 1041 aaKnown RBP16.76■□□□□ 0.27
CD9-210ENST00000543916 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 PADI3Q9ULW8 664 aa16.76■□□□□ 0.27
CD9-210ENST00000543916 A0A1W2PPC1 479 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 CSDE1O75534 798 aaKnown RBP16.75■□□□□ 0.27
CD9-210ENST00000543916 DARSP14868 501 aaKnown RBP16.75■□□□□ 0.27
CD9-210ENST00000543916 GLRA2P23416 452 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 EIF4BP23588 611 aaKnown RBP16.75■□□□□ 0.27
CD9-210ENST00000543916 PAK2Q13177 524 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 CAPSQ13938 189 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 NAALADL2Q58DX5 795 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 RESP18Q5W5W9 173 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 ZNF410Q86VK4 478 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 FAM228AQ86W67 206 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 PDILTQ8N807 584 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
CD9-210ENST00000543916 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 SCAND2PQ9GZW5 306 aaPredicted RBP16.75■□□□□ 0.27
CD9-210ENST00000543916 IFT122Q9HBG6 1241 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 ERVK-5Q9HDB9 667 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 MYH11P35749 1972 aa16.75■□□□□ 0.27
CD9-210ENST00000543916 ZBBXA8MT70 800 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 ASAP2O43150 1006 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 RPS6KA5O75582 802 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 BAIAP3O94812 1187 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 FGFR4P22455 802 aa16.74■□□□□ 0.27
CD9-210ENST00000543916 WDR5P61964 334 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms