RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 ERCC4Q92889 916 aaPredicted RBP23.08■■□□□ 1.29
OTUB1-211ENST00000543004 DNAJC19Q96DA6 116 aa23.08■■□□□ 1.29
OTUB1-211ENST00000543004 POLR3FQ9H1D9 316 aaPredicted RBP23.08■■□□□ 1.29
OTUB1-211ENST00000543004 SUCLA2Q9P2R7 463 aaPredicted RBP23.08■■□□□ 1.29
OTUB1-211ENST00000543004 USP25Q9UHP3 1055 aa23.08■■□□□ 1.29
OTUB1-211ENST00000543004 AKT3Q9Y243 479 aa23.08■■□□□ 1.29
OTUB1-211ENST00000543004 UMODL1Q5DID0 1318 aa23.08■■□□□ 1.29
OTUB1-211ENST00000543004 TLR3O15455 904 aaKnown RBP23.08■■□□□ 1.28
OTUB1-211ENST00000543004 KRT18P05783 430 aaKnown RBP23.08■■□□□ 1.28
OTUB1-211ENST00000543004 TAF2Q6P1X5 1199 aa23.08■■□□□ 1.28
OTUB1-211ENST00000543004 MCPH1Q8NEM0 835 aa23.08■■□□□ 1.28
OTUB1-211ENST00000543004 ASAP3Q8TDY4 903 aa23.08■■□□□ 1.28
OTUB1-211ENST00000543004 BSNDQ8WZ55 320 aa23.08■■□□□ 1.28
OTUB1-211ENST00000543004 TRIM9Q9C026 710 aa23.08■■□□□ 1.28
OTUB1-211ENST00000543004 KINO60870 393 aaKnown RBP23.07■■□□□ 1.28
OTUB1-211ENST00000543004 CTSHP09668 335 aa23.07■■□□□ 1.28
OTUB1-211ENST00000543004 ARL2P36404 184 aa23.07■■□□□ 1.28
OTUB1-211ENST00000543004 THPOP40225 353 aa23.07■■□□□ 1.28
OTUB1-211ENST00000543004 RHPN2Q8IUC4 686 aa23.07■■□□□ 1.28
OTUB1-211ENST00000543004 JPH2Q9BR39 696 aaPredicted RBP23.07■■□□□ 1.28
OTUB1-211ENST00000543004 MAGEF1Q9HAY2 307 aa23.07■■□□□ 1.28
OTUB1-211ENST00000543004 CDHR5Q9HBB8 845 aa23.07■■□□□ 1.28
OTUB1-211ENST00000543004 TNRC18O15417 2968 aaPredicted RBP23.06■■□□□ 1.28
OTUB1-211ENST00000543004 CAPN15O75808 1086 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 CLTBP09497 229 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 GLRA2P23416 452 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 TMOD1P28289 359 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 MDM2Q00987 491 aaPredicted RBP23.06■■□□□ 1.28
OTUB1-211ENST00000543004 IER5Q5VY09 327 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 EXOC8Q8IYI6 725 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 OSBPL7Q9BZF2 842 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 KCND2Q9NZV8 630 aa23.06■■□□□ 1.28
OTUB1-211ENST00000543004 CKBP12277 381 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 DNM2P50570 870 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 PNOCQ13519 176 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 CAMK4Q16566 473 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 KIZQ2M2Z5 673 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 ZNF618Q5T7W0 954 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 PSPC1Q8WXF1 523 aaKnown RBP23.05■■□□□ 1.28
OTUB1-211ENST00000543004 TIGD1Q96MW7 591 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 C7orf25Q9BPX7 421 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 PPP1R12CQ9BZL4 782 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 ZHX3Q9H4I2 956 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 PRDM5Q9NQX1 630 aaPredicted RBP23.05■■□□□ 1.28
OTUB1-211ENST00000543004 TMEM39AQ9NV64 488 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 TBX21Q9UL17 535 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 GINS2Q9Y248 185 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 SCN5AQ14524 2016 aa23.05■■□□□ 1.28
OTUB1-211ENST00000543004 TRIM43BA6NCK2 446 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 GAS2O43903 313 aaKnown RBP23.04■■□□□ 1.28
OTUB1-211ENST00000543004 ITGB8P26012 769 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 NLRP11P59045 1033 aaKnown RBP23.04■■□□□ 1.28
OTUB1-211ENST00000543004 LAMTOR4Q0VGL1 99 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 C7orf61Q8IZ16 206 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 TCP11Q8WWU5 503 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 TRIM43Q96BQ3 446 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-211ENST00000543004 NLRP4Q96MN2 994 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 MAP7D2Q96T17 732 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 NOC4LQ9BVI4 516 aaKnown RBP23.04■■□□□ 1.28
OTUB1-211ENST00000543004 COL4A3BPQ9Y5P4 624 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 GPR32O75388 356 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 CHRNA1P02708 482 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 SRGAP2CP0DJJ0 459 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 IDEP14735 1019 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 ASIC1P78348 528 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 AMPD3Q01432 767 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 CAPSQ13938 189 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 NFKBIBQ15653 356 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 TRAF7Q6Q0C0 670 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 HIPK3Q9H422 1215 aa23.04■■□□□ 1.28
OTUB1-211ENST00000543004 TANC1Q9C0D5 1861 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 GPC3P51654 580 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 MRPS6P82932 125 aaKnown RBP23.03■■□□□ 1.28
OTUB1-211ENST00000543004 POSTNQ15063 836 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 RPAINQ86UA6 219 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 KIFAP3Q92845 792 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 HPS3Q969F9 1004 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 HTATIP2Q9BUP3 242 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 KIFC3Q9BVG8 833 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 ADAMTS10Q9H324 1103 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 ODF2LQ9ULJ1 636 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 CDY2AQ9Y6F7 541 aa23.03■■□□□ 1.28
OTUB1-211ENST00000543004 A0A087WZ62 844 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 GTPBP6O43824 516 aaPredicted RBP23.02■■□□□ 1.28
OTUB1-211ENST00000543004 CSDE1O75534 798 aaKnown RBP23.02■■□□□ 1.28
OTUB1-211ENST00000543004 CYP2C18P33260 490 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 PEX3P56589 373 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 MGAT3Q09327 533 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 DPYDQ12882 1025 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 NME8Q8N427 588 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 DRC1Q96MC2 740 aa23.02■■□□□ 1.28
OTUB1-211ENST00000543004 FDXACB1Q9BRP7 624 aaPredicted RBP23.02■■□□□ 1.28
OTUB1-211ENST00000543004 KLRC4O43908 158 aa23.01■■□□□ 1.27
OTUB1-211ENST00000543004 TBCAO75347 108 aaKnown RBP23.01■■□□□ 1.27
OTUB1-211ENST00000543004 FAM13AO94988 1023 aa23.01■■□□□ 1.27
OTUB1-211ENST00000543004 ZNF131P52739 623 aa23.01■■□□□ 1.27
OTUB1-211ENST00000543004 CCL23P55773 120 aa23.01■■□□□ 1.27
OTUB1-211ENST00000543004 KANK3Q6NY19 840 aa23.01■■□□□ 1.27
OTUB1-211ENST00000543004 RSPH3Q86UC2 560 aa23.01■■□□□ 1.27
OTUB1-211ENST00000543004 RNF149Q8NC42 400 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms