RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SMARCAL1Q9NZC9 954 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 TMEM59LQ9UK28 342 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 FRMD4BQ9Y2L6 1034 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 MYH11P35749 1972 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 NCANO14594 1321 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ZNF536O15090 1300 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SFI1A8K8P3 1242 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 F8VZ95 297 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 WDR46O15213 610 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 KIF4AO95239 1232 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 LYPLA2O95372 231 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 H2AFZP0C0S5 128 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SOX5P35711 763 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 HNRNPH2P55795 449 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 TNNC1P63316 161 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 PAK2Q13177 524 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ZSCAN26Q16670 478 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ZC2HC1CQ53FD0 456 aaPredicted RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ODR4Q5SWX8 454 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 ALS2CLQ60I27 953 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 H2AFVQ71UI9 128 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SND1Q7KZF4 910 aaKnown RBP eCLIP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 MCF2L2Q86YR7 1114 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 C12orf56Q8IXR9 622 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 GOLGA6L1Q8N7Z2 621 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 USP38Q8NB14 1042 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 AFAP1L1Q8TED9 768 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 LMBR1Q8WVP7 490 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 LPAR1Q92633 364 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 VTI1AQ96AJ9 217 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 MS4A14Q96JA4 679 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 CALR3Q96L12 384 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 SYT11Q9BT88 431 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 STK33Q9BYT3 514 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 TMEM39BQ9GZU3 492 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 VEZTQ9HBM0 779 aa7.14□□□□□ -1.27
PTPRO-208ENST00000542557 DBR1Q9UK59 544 aaKnown RBP7.14□□□□□ -1.27
PTPRO-208ENST00000542557 DDX3XO00571 662 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 P4HBP07237 508 aaKnown RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 CCDC172P0C7W6 258 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ZBTB48P10074 688 aaPredicted RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 CAPN2P17655 700 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ITGB5P18084 799 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 LMNB1P20700 586 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 GGCXP38435 758 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 MATR3P43243 847 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 UBXN2AP68543 259 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 TNIP1Q15025 636 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 SLC30A10Q6XR72 485 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 LEKR1Q6ZMV7 388 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 SYCE1Q8N0S2 351 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 MREGQ8N565 214 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 TPCN2Q8NHX9 752 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 SLC30A5Q8TAD4 765 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 OLIG1Q8TAK6 271 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ACTRT1Q8TDG2 376 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 TIPINQ9BVW5 301 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 FBXO28Q9NVF7 368 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 CWC15Q9P013 229 aaKnown RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 APEX2Q9UBZ4 518 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 PNMA2Q9UL42 364 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 CCPG1Q9ULG6 757 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 GOLGA8KD6RF30 607 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ZBTB39O15060 712 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 P4HA2O15460 535 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 EVI5O60447 810 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 HIP1RO75146 1068 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 IVLP07476 585 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 SNRPFP62306 86 aaKnown RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 SLC7A5Q01650 507 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 BFSP1Q12934 665 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ENOX2Q16206 610 aaKnown RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 CDAN1Q8IWY9 1227 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 DAW1Q8N136 415 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 CLEC4DQ8WXI8 215 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 INTS2Q9H0H0 1204 aaKnown RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ST6GALNAC4Q9H4F1 302 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 TMEM206Q9H813 350 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 SUCLA2Q9P2R7 463 aaPredicted RBP7.13□□□□□ -1.27
PTPRO-208ENST00000542557 ZNRF3Q9ULT6 936 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 UBIAD1Q9Y5Z9 338 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 FER1L6Q2WGJ9 1857 aa7.13□□□□□ -1.27
PTPRO-208ENST00000542557 MAPK13O15264 365 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 DHX15O43143 795 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 OPA1O60313 960 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PHACTR2O75167 634 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 HEXIM1O94992 359 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 TMEM253P0C7T8 217 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 MYL7Q01449 175 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 COG2Q14746 738 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 ZYXQ15942 572 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 GJB7Q6PEY0 223 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PADI6Q6TGC4 694 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 MIER3Q7Z3K6 550 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 PRPF38AQ8NAV1 312 aaKnown RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 LNX1Q8TBB1 728 aaPredicted RBP7.12□□□□□ -1.27
PTPRO-208ENST00000542557 SCFD2Q8WU76 684 aa7.12□□□□□ -1.27
PTPRO-208ENST00000542557 CAMKK2Q96RR4 588 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms