RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 TMOD1P28289 359 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 GATMP50440 423 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 NFX1Q12986 1120 aaKnown RBP12.88□□□□□ -0.35
C2CD3-217ENST00000542452 PTGDRQ13258 359 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-217ENST00000542452 PIGOQ8TEQ8 1089 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 ARNTL2Q8WYA1 636 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 TMEM143Q96AN5 459 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-217ENST00000542452 FDXACB1Q9BRP7 624 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-217ENST00000542452 C17orf80Q9BSJ5 609 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 FTHL17Q9BXU8 183 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-217ENST00000542452 MTUS1Q9ULD2 1270 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
C2CD3-217ENST00000542452 PP2D1A8MPX8 630 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 H3BQV1 296 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 RFC5P40937 340 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 RARRES1P49788 294 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.35
C2CD3-217ENST00000542452 POLGP54098 1239 aaPredicted RBP12.87□□□□□ -0.35
C2CD3-217ENST00000542452 ERVK-21P61565 698 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 XKR9Q5GH70 373 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
C2CD3-217ENST00000542452 RHPN2Q8IUC4 686 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 ASAP3Q8TDY4 903 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 YME1L1Q96TA2 773 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 INSL6Q9Y581 213 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
C2CD3-217ENST00000542452 C9IYK1 514 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 DGKIO75912 1065 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 IBSPP21815 317 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-217ENST00000542452 EIF4BP23588 611 aaKnown RBP12.86□□□□□ -0.35
C2CD3-217ENST00000542452 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-217ENST00000542452 GRB10Q13322 594 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 RILPL1Q5EBL4 403 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 IGSF22Q8N9C0 903 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 SLC7A3Q8WY07 619 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 SNX21Q969T3 373 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 SCLT1Q96NL6 688 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
C2CD3-217ENST00000542452 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-217ENST00000542452 ADAM2Q99965 735 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 POLR3CQ9BUI4 534 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-217ENST00000542452 MINDY3Q9H8M7 445 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 RGS18Q9NS28 235 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 RNF19AQ9NV58 838 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 HCSTQ9UBK5 93 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 COL4A3BPQ9Y5P4 624 aa12.86□□□□□ -0.35
C2CD3-217ENST00000542452 VPS37CA5D8V6 355 aaPredicted RBP12.85□□□□□ -0.35
C2CD3-217ENST00000542452 GPR182O15218 404 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
C2CD3-217ENST00000542452 RPA1P27694 616 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 SARSP49591 514 aaKnown RBP12.85□□□□□ -0.35
C2CD3-217ENST00000542452 RESTQ13127 1097 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 OTUD6AQ7L8S5 288 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 ZNF410Q86VK4 478 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
C2CD3-217ENST00000542452 MTRQ99707 1265 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 MMTAG2Q9BU76 263 aaKnown RBP12.85□□□□□ -0.35
C2CD3-217ENST00000542452 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 REV3LO60673 3130 aa12.85□□□□□ -0.35
C2CD3-217ENST00000542452 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 SYT1P21579 422 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 IGFBP4P22692 258 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 CDC25AP30304 524 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 PRPHP41219 470 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 CAPSQ13938 189 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 PAN2Q504Q3 1202 aaKnown RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 PSPC1Q8WXF1 523 aaKnown RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 INTS4Q96HW7 963 aaKnown RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 LRWD1Q9UFC0 647 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 MTMR6Q9Y217 621 aa12.84□□□□□ -0.35
C2CD3-217ENST00000542452 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
C2CD3-217ENST00000542452 DGAT1O75907 488 aa12.83□□□□□ -0.36
C2CD3-217ENST00000542452 FGFR1P11362 822 aa12.83□□□□□ -0.36
C2CD3-217ENST00000542452 GLRA2P23416 452 aa12.83□□□□□ -0.36
C2CD3-217ENST00000542452 ARL2P36404 184 aa12.83□□□□□ -0.36
C2CD3-217ENST00000542452 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
C2CD3-217ENST00000542452 DNM2P50570 870 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms