RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ADAMTS19Q8TE59 1207 aa18.41■□□□□ 0.54
CCND1-205ENST00000542367 NLRP7Q8WX94 980 aa18.41■□□□□ 0.54
CCND1-205ENST00000542367 WRAP73Q9P2S5 460 aaPredicted RBP18.41■□□□□ 0.54
CCND1-205ENST00000542367 MUC3AQ02505 3323 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 GRM6O15303 877 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 DARSP14868 501 aaKnown RBP18.4■□□□□ 0.54
CCND1-205ENST00000542367 ZSCAN20P17040 1043 aaPredicted RBP18.4■□□□□ 0.54
CCND1-205ENST00000542367 NPEPPSP55786 919 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 CDC42EP1Q00587 391 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 SPIRE1Q08AE8 756 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 TIGD5Q53EQ6 642 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 ZSCAN31Q96LW9 406 aaPredicted RBP18.4■□□□□ 0.54
CCND1-205ENST00000542367 LLPHQ9BRT6 129 aaKnown RBP18.4■□□□□ 0.54
CCND1-205ENST00000542367 PLVAPQ9BX97 442 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 CYP26B1Q9NR63 512 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 RGL1Q9NZL6 768 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 SUCLA2Q9P2R7 463 aaPredicted RBP18.4■□□□□ 0.54
CCND1-205ENST00000542367 PCDHA12Q9UN75 941 aa18.4■□□□□ 0.54
CCND1-205ENST00000542367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 WNT7AO00755 349 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 CSDE1O75534 798 aaKnown RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 FGFR4P22455 802 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 CALCRLQ16602 461 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 RHPN2Q8IUC4 686 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 C4orf19Q8IY42 314 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 DYDC2Q96IM9 177 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 CEP170P1Q96L14 293 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 LXNQ9BS40 222 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 GCOM2Q9BZD3 368 aaPredicted RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 LMAN2LQ9H0V9 348 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 NSUN3Q9H649 340 aaKnown RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 ELAC1Q9H777 363 aaKnown RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 UBE2ZQ9H832 354 aaPredicted RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 ATP6V0A4Q9HBG4 840 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 ALG13Q9NP73 1137 aaKnown RBP18.39■□□□□ 0.53
CCND1-205ENST00000542367 TMEM161AQ9NX61 479 aa18.39■□□□□ 0.53
CCND1-205ENST00000542367 A0A087WZ62 844 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 TBKBP1A7MCY6 615 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 TNFRSF10AO00220 468 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 ATP2B1P20020 1258 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 YWHABP31946 246 aaKnown RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 TXKP42681 527 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 CYP4A11Q02928 519 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 CTTNQ14247 550 aaKnown RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCND1-205ENST00000542367 TCEAL5Q5H9L2 206 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 P2RX5Q93086 422 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 C8orf76Q96K31 380 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 NECAB3Q96P71 396 aaPredicted RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 JPH2Q9BR39 696 aaPredicted RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 FDXACB1Q9BRP7 624 aaPredicted RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 ZSWIM4Q9H7M6 989 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 TTC12Q9H892 705 aaPredicted RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
CCND1-205ENST00000542367 PLAGL2Q9UPG8 496 aa18.38■□□□□ 0.53
CCND1-205ENST00000542367 MYO7AQ13402 2215 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 ZBTB39O15060 712 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 NEMFO60524 1076 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 SLITRK3O94933 977 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 FGFR1P11362 822 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
CCND1-205ENST00000542367 NAALADL2Q58DX5 795 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
CCND1-205ENST00000542367 OTUD6AQ7L8S5 288 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 TPH2Q8IWU9 490 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 KLHL23Q8NBE8 558 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 SLC7A3Q8WY07 619 aa18.37■□□□□ 0.53
CCND1-205ENST00000542367 FNDC1Q4ZHG4 1894 aaPredicted RBP18.37■□□□□ 0.53
CCND1-205ENST00000542367 CSPG5O95196 566 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 ITGB1P05556 798 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 KCNA5P22460 613 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 POLGP54098 1239 aaPredicted RBP18.36■□□□□ 0.53
CCND1-205ENST00000542367 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
CCND1-205ENST00000542367 ZNF410Q86VK4 478 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 ECHDC2Q86YB7 292 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 EXOC8Q8IYI6 725 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 SPPL3Q8TCT6 385 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 NLRP4Q96MN2 994 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 EIF2AK1Q9BQI3 630 aaKnown RBP18.36■□□□□ 0.53
CCND1-205ENST00000542367 KIAA1671Q9BY89 1806 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 DHX33Q9H6R0 707 aaKnown RBP18.36■□□□□ 0.53
CCND1-205ENST00000542367 TYW1Q9NV66 732 aaKnown RBP18.36■□□□□ 0.53
CCND1-205ENST00000542367 PPME1Q9Y570 386 aa18.36■□□□□ 0.53
CCND1-205ENST00000542367 DNAJB1P25685 340 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 MCM7P33993 719 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 RFC5P40937 340 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 CAMK1Q14012 370 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 XKR9Q5GH70 373 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 FBXO18Q8NFZ0 1043 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 TMEM143Q96AN5 459 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 HSD17B14Q9BPX1 270 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 INO80BQ9C086 356 aaPredicted RBP18.35■□□□□ 0.53
CCND1-205ENST00000542367 TMEM60Q9H2L4 133 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 AAASQ9NRG9 546 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms