RNA–Protein interactions for RNA: ENST00000542279.5

GTF2H3-209, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-209ENST00000542279 DDX3XO00571 662 aaKnown RBP eCLIP4.72□□□□□ -1.658e-13■■■■■ 31
GTF2H3-209ENST00000542279 TADA3O75528 432 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 LSP1P33241 339 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 GJA4P35212 333 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 RAB27AP51159 221 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 EPHA5P54756 1037 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 SCAND1P57086 179 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 PHC1P78364 1004 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 ABHD18Q0P651 414 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 KLF1Q13351 362 aaPredicted RBP4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 LRRC41Q15345 812 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 CC2D1AQ6P1N0 951 aaPredicted RBP4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 ARHGEF18Q6ZSZ5 1173 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 DNAJC10Q8IXB1 793 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 CMIPQ8IY22 773 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 KYQ8NBH2 561 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 RTF1Q92541 710 aaKnown RBP4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 DLG3Q92796 817 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 ERCC4Q92889 916 aaPredicted RBP4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 C11orf84Q9BUA3 381 aaPredicted RBP4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 ZMAT4Q9H898 229 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 ACSS2Q9NR19 701 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 ZIM2Q9NZV7 527 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 NOC2LQ9Y3T9 749 aaKnown RBP4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 TNKSO95271 1327 aa4.72□□□□□ -1.65
GTF2H3-209ENST00000542279 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 FOXP2O15409 715 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 AKAP10O43572 662 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 TSPAN6O43657 245 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 C4BPAP04003 597 aaKnown RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 MMEP08473 750 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 CD40P25942 277 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 PPP2CBP62714 309 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 PPP2CAP67775 309 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 SMAD3P84022 425 aaKnown RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 FAPQ12884 760 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 SMAD2Q15796 467 aaKnown RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 NFE2Q16621 373 aaPredicted RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 CATSPEREQ5SY80 951 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 ZZZ3Q8IYH5 903 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 CBARPQ8N350 705 aaPredicted RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 ZNF610Q8N9Z0 462 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 CLEC4DQ8WXI8 215 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 NAF1Q96HR8 494 aaKnown RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 CSRNP2Q9H175 543 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 CD248Q9HCU0 757 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 TOPORSQ9NS56 1045 aaPredicted RBP4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 MSRAQ9UJ68 235 aa4.71□□□□□ -1.66
GTF2H3-209ENST00000542279 C9orf118A6NHY6 69 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 RASSF10A6NK89 507 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 K7ESF4 209 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 ACOT7O00154 380 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 XPOTO43592 962 aaKnown RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 ZNF623O75123 536 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 H2AFYO75367 372 aaKnown RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 CYP17A1P05093 508 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 CCND1P24385 295 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 LMO1P25800 156 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 MCM7P33993 719 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 THBS2P35442 1172 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 ATXN1P54253 815 aaKnown RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 PAN2Q504Q3 1202 aaKnown RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 SPDYAQ5MJ70 313 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 CCDC181Q5TID7 509 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 PRAMEF18Q5VWM3 479 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 PNMA8AQ86V59 439 aaPredicted RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 ZC3H18Q86VM9 953 aaKnown RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 TRIM48Q8IWZ4 208 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 C7orf31Q8N865 590 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 HIPK4Q8NE63 616 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 TGFBRAP1Q8WUH2 860 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 RTFDC1Q9BY42 306 aaPredicted RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 ZDHHC5Q9C0B5 715 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 DTLQ9NZJ0 730 aa4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 LUC7L2Q9Y383 392 aaKnown RBP4.7□□□□□ -1.66
GTF2H3-209ENST00000542279 GOLGA8AA7E2F4 631 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 GOLGA8BA8MQT2 603 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 CT47B1P0C2W7 299 aaPredicted RBP4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 SDHAP31040 664 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 MC4RP32245 332 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 FNTBP49356 437 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 DPTQ07507 201 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 FOXE3Q13461 319 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 LRRC32Q14392 662 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 CLUL1Q15846 466 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 GPR158Q5T848 1215 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 PGM2L1Q6PCE3 622 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 CD300LDQ6UXZ3 194 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 RASSF3Q86WH2 238 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 AMOTL1Q8IY63 956 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 C1orf162Q8NEQ5 155 aaPredicted RBP4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 TTLL11Q8NHH1 800 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 IGDCC4Q8TDY8 1250 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 ASB15Q8WXK1 588 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 FUBP3Q96I24 572 aaKnown RBP eCLIP4.69□□□□□ -1.661e-8■■■■■ 27.5
GTF2H3-209ENST00000542279 CCDC136Q96JN2 1154 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 GBP4Q96PP9 640 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 GORASP1Q9BQQ3 440 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 CDH19Q9H159 772 aa4.69□□□□□ -1.66
GTF2H3-209ENST00000542279 POFUT1Q9H488 388 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms