RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 LACRTQ9GZZ8 138 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 IL1RAPL1Q9NZN1 696 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 PPP1R1BQ9UD71 204 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-219ENST00000542112 ADAMTS1Q9UHI8 967 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 SAP30BPQ9UHR5 308 aaKnown RBP4.73□□□□□ -1.65
SNHG1-219ENST00000542112 MTUS1Q9ULD2 1270 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 CYP8B1Q9UNU6 501 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 RPL26L1Q9UNX3 145 aaKnown RBP4.73□□□□□ -1.65
SNHG1-219ENST00000542112 TRIM33Q9UPN9 1127 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 MRPL11Q9Y3B7 192 aaKnown RBP4.73□□□□□ -1.65
SNHG1-219ENST00000542112 C2CD2Q9Y426 696 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 LRRC42Q9Y546 428 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 NRXN1Q9ULB1 1477 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 PREX1Q8TCU6 1659 aa4.73□□□□□ -1.65
SNHG1-219ENST00000542112 GRIN2DO15399 1336 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ABCC3O15438 1527 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 AGLP35573 1532 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 USP27XA6NNY8 438 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MINDY4BA8MYZ0 360 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MATN2O00339 956 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 TERTO14746 1132 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 N4BP3O15049 544 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 AKR1B10O60218 316 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 DIAPH1O60610 1272 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 TSPAN1O60635 241 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CBFA2T3O75081 653 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SKAP2O75563 359 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MAP4K4O95819 1239 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SYF2O95926 243 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ALDH2P05091 517 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 HSPA1AP0DMV8 641 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 HSPA1BP0DMV9 641 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ZSCAN22P10073 491 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ESRRAP11474 423 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 EPXP11678 715 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 PTPN2P17706 415 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ENDOUP21128 410 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 PEX5P50542 639 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 RARSP54136 660 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MTTPP55157 894 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 GEMIN4P57678 1058 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 GNGT1P63211 74 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 GSTM4Q03013 218 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 KLC1Q07866 573 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MAP3K12Q12852 859 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MYO1EQ12965 1108 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 NFX1Q12986 1120 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 COL9A2Q14055 689 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 IKBKEQ14164 716 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 LRRC14Q15048 493 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 RASA2Q15283 850 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 NFE2L2Q16236 605 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ALDH1L2Q3SY69 923 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SPECC1Q5M775 1068 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 RNFT1Q5M7Z0 435 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SNAP47Q5SQN1 464 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 GALNT17Q6IS24 598 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 TMEM53Q6P2H8 277 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 KDM7AQ6ZMT4 941 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 NEK10Q6ZWH5 1172 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ZNF804AQ7Z570 1209 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC84Q86UT8 332 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 FAM228AQ86W67 206 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 PASD1Q8IV76 773 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CROCCP3Q8IVE0 287 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SLC7A5P1Q8MH63 180 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ARL6IP6Q8N6S5 226 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SPERTQ8NA61 448 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC148Q8NFR7 591 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ZNF296Q8WUU4 475 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 KIFAP3Q92845 792 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 PTPRN2Q92932 1015 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 WNT8BQ93098 351 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 RRP36Q96EU6 259 aaKnown RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 VMP1Q96GC9 406 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SEC16BQ96JE7 1060 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CLIC6Q96NY7 704 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 OLFM3Q96PB7 478 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 HAPLN3Q96S86 360 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 NUP58Q9BVL2 599 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 NT5C1AQ9BXI3 368 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SCAND2PQ9GZW5 306 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 SOX17Q9H6I2 414 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-219ENST00000542112 KAT14Q9H8E8 782 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 PREBQ9HCU5 417 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 DISC1Q9NRI5 854 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 LRRC4BQ9NT99 713 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 DCAF16Q9NXF7 216 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CDC23Q9UJX2 597 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 KIAA0232Q92628 1395 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 ROBO2Q9HCK4 1378 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 IQGAP1P46940 1657 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 MADDQ8WXG6 1647 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 RGS12O14924 1447 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 GAKO14976 1311 aa4.72□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC194A0A1B0GVG4 234 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 FRMD3A2A2Y4 597 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 CTAGE15A4D2H0 777 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 F6X3S4 739 aa4.71□□□□□ -1.66
SNHG1-219ENST00000542112 H3BRJ5 948 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms