RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 BCAR1P56945 870 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 PPP2CBP62714 309 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 PPP2CAP67775 309 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 FAPQ12884 760 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 ZMAT1Q5H9K5 638 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 RNF219Q5W0B1 726 aaPredicted RBP4.42□□□□□ -1.7
USP28-210ENST00000542033 KANK2Q63ZY3 851 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 GLB1LQ6UWU2 654 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 RASSF3Q86WH2 238 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 DDX42Q86XP3 938 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP28-210ENST00000542033 SPATS2Q86XZ4 545 aaKnown RBP4.42□□□□□ -1.7
USP28-210ENST00000542033 MYL10Q9BUA6 226 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 FAM126AQ9BYI3 521 aaPredicted RBP4.42□□□□□ -1.7
USP28-210ENST00000542033 ZDHHC5Q9C0B5 715 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 KATNBL1Q9H079 304 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 JADE2Q9NQC1 790 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 Q9UFV3 132 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 CDC42EP3Q9UKI2 254 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 NCANO14594 1321 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 hCG_2014768A0A024R1R8 64 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 B4GALT4O60513 344 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 MAFO75444 373 aaPredicted RBP4.41□□□□□ -1.7
USP28-210ENST00000542033 ITGB3P05106 788 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 CSF2RBP32927 897 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 MEOX1P50221 254 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 TOP3AQ13472 1001 aaPredicted RBP4.41□□□□□ -1.7
USP28-210ENST00000542033 MYBPC3Q14896 1274 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 NOLC1Q14978 699 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP28-210ENST00000542033 DGKDQ16760 1214 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 PTPROQ16827 1216 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 SPATS1Q496A3 300 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 TBC1D10BQ4KMP7 808 aaPredicted RBP4.41□□□□□ -1.7
USP28-210ENST00000542033 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 KIAA1841Q6NSI8 718 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 RTKN2Q8IZC4 609 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 ZNF496Q96IT1 587 aaPredicted RBP4.41□□□□□ -1.7
USP28-210ENST00000542033 MS4A5Q9H3V2 200 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 PCDH12Q9NPG4 1184 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 KCMF1Q9P0J7 381 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 SAE1Q9UBE0 346 aaPredicted RBP4.41□□□□□ -1.7
USP28-210ENST00000542033 SYNPO2Q9UMS6 1093 aa4.41□□□□□ -1.7
USP28-210ENST00000542033 LCHNA4D1U4 455 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 NPEPPSL1A6NEC2 478 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 POU3F3P20264 500 aaPredicted RBP4.4□□□□□ -1.71
USP28-210ENST00000542033 EPHB4P54760 987 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 IGBP1P78318 339 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 AMPD3Q01432 767 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 EIF4HQ15056 248 aaKnown RBP4.4□□□□□ -1.71
USP28-210ENST00000542033 ZNF827Q17R98 1081 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 SLFN13Q68D06 897 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 TMEM200BQ69YZ2 307 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 LHFPL2Q6ZUX7 228 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 GPR155Q7Z3F1 870 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 CXorf67Q86X51 503 aaPredicted RBP4.4□□□□□ -1.71
USP28-210ENST00000542033 TTC9BQ8N6N2 239 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 CLRN3Q8NCR9 226 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 OR5AN1Q8NGI8 311 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 ANO3Q9BYT9 981 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 SEMA4AQ9H3S1 761 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 MTG2Q9H4K7 406 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 SEC61A2Q9H9S3 476 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 SLC4A7Q9Y6M7 1214 aa4.4□□□□□ -1.71
USP28-210ENST00000542033 ELL2O00472 640 aaPredicted RBP4.39□□□□□ -1.71
USP28-210ENST00000542033 PCDH8O95206 1070 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 STAT5BP51692 787 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 RRADP55042 308 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 ANAPC15P60006 121 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 UNQ6494/PRO21346Q6UXR6 183 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 KANSL1Q7Z3B3 1105 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 BMP8AQ7Z5Y6 402 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 NECAB2Q7Z6G3 386 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 CIR1Q86X95 450 aaPredicted RBP4.39□□□□□ -1.71
USP28-210ENST00000542033 AHCYL2Q96HN2 611 aaKnown RBP4.39□□□□□ -1.71
USP28-210ENST00000542033 SAMD11Q96NU1 681 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 ACAP3Q96P50 834 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 NOL10Q9BSC4 688 aaKnown RBP4.39□□□□□ -1.71
USP28-210ENST00000542033 WNT8AQ9H1J5 351 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 TOPORSQ9NS56 1045 aaPredicted RBP4.39□□□□□ -1.71
USP28-210ENST00000542033 SLC5A4Q9NY91 659 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 MAGEL2Q9UJ55 1249 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 FAM184BQ9ULE4 1060 aa4.39□□□□□ -1.71
USP28-210ENST00000542033 NOP58Q9Y2X3 529 aaKnown RBP4.39□□□□□ -1.71
USP28-210ENST00000542033 GOLGA8AA7E2F4 631 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 GOLGA8BA8MQT2 603 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 ALG1L2C9J202 215 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 PRKD3O94806 890 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 CLEC2LP0C7M8 214 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 ZNF888P0CJ79 500 aaPredicted RBP4.38□□□□□ -1.71
USP28-210ENST00000542033 SCAND1P57086 179 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 SESN2P58004 480 aaPredicted RBP4.38□□□□□ -1.71
USP28-210ENST00000542033 RAC3P60763 192 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 EFEMP1Q12805 493 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 PCOLCEQ15113 449 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 ZBTB41Q5SVQ8 909 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 CCDC62Q6P9F0 684 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 PRRT2Q7Z6L0 340 aaPredicted RBP4.38□□□□□ -1.71
USP28-210ENST00000542033 PRPF38AQ8NAV1 312 aaKnown RBP4.38□□□□□ -1.71
USP28-210ENST00000542033 CHST13Q8NET6 341 aa4.38□□□□□ -1.71
USP28-210ENST00000542033 COG1Q8WTW3 980 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms