RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 POLR2MP0CAP2 368 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 CTNNA1P35221 906 aaKnown RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 PLTPP55058 493 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 MED4Q9NPJ6 270 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
VARS2-211ENST00000541562 KIF4AO95239 1232 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 CYP3A4P08684 503 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 HS2ST1Q7LGA3 356 aa16.35■□□□□ 0.21
VARS2-211ENST00000541562 IFFO1Q0D2I5 559 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
VARS2-211ENST00000541562 MGARPQ8TDB4 240 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 CCDC17Q96LX7 622 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 PARVGQ9HBI0 331 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
VARS2-211ENST00000541562 EMSYQ7Z589 1322 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 IPO5O00410 1097 aaKnown RBP16.34■□□□□ 0.21
VARS2-211ENST00000541562 GCFC2P16383 781 aaKnown RBP16.34■□□□□ 0.21
VARS2-211ENST00000541562 PDE6BP35913 854 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 EPHB4P54760 987 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 CAPN12Q6ZSI9 719 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 CYFIP1Q7L576 1253 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 LDHDQ86WU2 507 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 CTNNBL1Q8WYA6 563 aaPredicted RBP16.34■□□□□ 0.21
VARS2-211ENST00000541562 FBXL5Q9UKA1 691 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 FRMD4BQ9Y2L6 1034 aa16.34■□□□□ 0.21
VARS2-211ENST00000541562 H0YHG0 523 aa16.33■□□□□ 0.21
VARS2-211ENST00000541562 OTUD6AQ7L8S5 288 aa16.33■□□□□ 0.21
VARS2-211ENST00000541562 PRUNE1Q86TP1 453 aa16.33■□□□□ 0.21
VARS2-211ENST00000541562 ARHGEF19Q8IW93 802 aa16.33■□□□□ 0.21
VARS2-211ENST00000541562 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.21
VARS2-211ENST00000541562 USP11P51784 963 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 KRT35Q92764 455 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 ERVK-5Q9HDB9 667 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 COL20A1Q9P218 1284 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 NOVA2Q9UNW9 492 aaKnown RBP16.33■□□□□ 0.2
VARS2-211ENST00000541562 IFNAR2P48551 515 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 FIGNQ5HY92 759 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 MEI1Q5TIA1 1274 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 MIER3Q7Z3K6 550 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 PASD1Q8IV76 773 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 USP38Q8NB14 1042 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 GJA3Q9Y6H8 435 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.2
VARS2-211ENST00000541562 KRT5P13647 590 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 PHLDB3Q6NSJ2 640 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 OTOP1Q7RTM1 612 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 MMGT1Q8N4V1 131 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 VAV3Q9UKW4 847 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 TCRBV7S2A1N4TA0A589 114 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 FLOT1O75955 427 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 GJB6O95452 261 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 EPHA7Q15375 998 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 EEPD1Q7L9B9 569 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 FAM212AQ96EL1 285 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 PWWP2AQ96N64 755 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 SELENOSQ9BQE4 189 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 CYP26A1O43174 497 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 MCM3P25205 808 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 RPL13P26373 211 aaKnown RBP16.32■□□□□ 0.2
VARS2-211ENST00000541562 KRT71Q3SY84 523 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 PADI6Q6TGC4 694 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 KLHL11Q9NVR0 708 aa16.32■□□□□ 0.2
VARS2-211ENST00000541562 ATP9AO75110 1047 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 PPP1R2P41236 205 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 MYL7Q01449 175 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 TPCN2Q8NHX9 752 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 CEP63Q96MT8 703 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 TRIM7Q9C029 511 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 TYW1Q9NV66 732 aaKnown RBP16.31■□□□□ 0.2
VARS2-211ENST00000541562 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
VARS2-211ENST00000541562 FMO5P49326 533 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 IFT88Q13099 833 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 PAK2Q13177 524 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 VPS36Q86VN1 386 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 THOC1Q96FV9 657 aaKnown RBP16.31■□□□□ 0.2
VARS2-211ENST00000541562 NYAP2Q9P242 653 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 PPP1R12BO60237 982 aaPredicted RBP16.31■□□□□ 0.2
VARS2-211ENST00000541562 ITGB5P18084 799 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 ADRA2BP18089 450 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 PSMC2P35998 433 aaKnown RBP16.31■□□□□ 0.2
VARS2-211ENST00000541562 UGCGQ16739 394 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 XKR9Q5GH70 373 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 C18orf8Q96DM3 657 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 HEMGNQ9BXL5 484 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 INTS2Q9H0H0 1204 aaKnown RBP16.31■□□□□ 0.2
VARS2-211ENST00000541562 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
VARS2-211ENST00000541562 EBAG9O00559 213 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 SGPL1O95470 568 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 FTLP02792 175 aaPredicted RBP16.3■□□□□ 0.2
VARS2-211ENST00000541562 TNNC1P63316 161 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 CBWD2Q8IUF1 395 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms