RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RAB34Q9BZG1 259 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 CNOT10Q9H9A5 744 aaKnown RBP11.38□□□□□ -0.59
CHFR-219ENST00000541341 DISC1Q9NRI5 854 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 MTMR4Q9NYA4 1195 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 NYAP2Q9P242 653 aa11.38□□□□□ -0.59
CHFR-219ENST00000541341 TNKSO95271 1327 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 CDH23Q9H251 3354 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 GOLGA6L10A0A0M3HER8 536 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 PVALEFA0A1B0GWK0 134 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 DNM1LO00429 736 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 PES1O00541 588 aaKnown RBP11.37□□□□□ -0.59
CHFR-219ENST00000541341 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
CHFR-219ENST00000541341 HOXC6P09630 235 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 EZRP15311 586 aaKnown RBP11.37□□□□□ -0.59
CHFR-219ENST00000541341 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
CHFR-219ENST00000541341 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
CHFR-219ENST00000541341 GBP1P32455 592 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 ICA1Q05084 483 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 LRRC63Q05C16 580 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 NR5A1Q13285 461 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 SPECC1Q5M775 1068 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 DAGLBQ8NCG7 672 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 P2RX5Q93086 422 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 CEP95Q96GE4 821 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 EPSTI1Q96J88 318 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 TSG101Q99816 390 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 SH2D4AQ9H788 454 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 KAT14Q9H8E8 782 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 KANSL2Q9H9L4 492 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 RIC8AQ9NPQ8 531 aa11.37□□□□□ -0.59
CHFR-219ENST00000541341 BZW2Q9Y6E2 419 aaKnown RBP11.37□□□□□ -0.59
CHFR-219ENST00000541341 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 BTNL10A8MVZ5 291 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 hCG_1984214I3L0E3 225 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 AKR1B10O60218 316 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 FAM107AO95990 144 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 PGK1P00558 417 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 DSG3P32926 999 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 PRCPP42785 496 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 EIF3BP55884 814 aaKnown RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 LRRC41Q15345 812 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 PFKFB3Q16875 520 aaPredicted RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 GPR153Q6NV75 609 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 CCDC121Q6ZUS5 278 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 ZNF713Q8N859 430 aaPredicted RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 ENAHQ8N8S7 591 aaPredicted RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 CCHCR1Q8TD31 782 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 TAF4BQ92750 862 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 TNFRSF25Q93038 417 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 CALML4Q96GE6 196 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 MAML3Q96JK9 1138 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 PBKQ96KB5 322 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 DRC1Q96MC2 740 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 OSBPL9Q96SU4 736 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 COL25A1Q9BXS0 654 aaPredicted RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 ARHGEF10LQ9HCE6 1279 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 KBTBD4Q9NVX7 518 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 HOXC10Q9NYD6 342 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 DONSONQ9NYP3 566 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 STK17AQ9UEE5 414 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 DIS3Q9Y2L1 958 aaKnown RBP11.36□□□□□ -0.59
CHFR-219ENST00000541341 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
CHFR-219ENST00000541341 A0A1B0GUA9 196 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 TRIM43BA6NCK2 446 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 CCDC188H7C350 402 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 SEPT4O43236 478 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 NMT2O60551 498 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 MSCO60682 206 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 PPP1R37O75864 691 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 TTLL1O95922 423 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 EEF2P13639 858 aaKnown RBP11.35□□□□□ -0.59
CHFR-219ENST00000541341 RXRAP19793 462 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 SMARCA1P28370 1054 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 AGBL2Q5U5Z8 902 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 RAB11FIP4Q86YS3 637 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 CREG2Q8IUH2 290 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.35□□□□□ -0.594e-7■□□□□ 10.2
CHFR-219ENST00000541341 GRAMD1CQ8IYS0 662 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 BLIDQ8IZY5 108 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 ARRDC4Q8NCT1 418 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 MYLIPQ8WY64 445 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 TRIM43Q96BQ3 446 aaPredicted RBP11.35□□□□□ -0.59
CHFR-219ENST00000541341 MMP19Q99542 508 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 CHP1Q99653 195 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 NAP1L4Q99733 375 aaKnown RBP11.35□□□□□ -0.59
CHFR-219ENST00000541341 TTYH3Q9C0H2 523 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 STMN4Q9H169 189 aaPredicted RBP11.35□□□□□ -0.59
CHFR-219ENST00000541341 VCPKMTQ9H867 229 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 PDLIM7Q9NR12 457 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 GDF3Q9NR23 364 aa11.35□□□□□ -0.59
CHFR-219ENST00000541341 TMX2Q9Y320 296 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms