RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 M0R2N6 131 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 FTCDO95954 541 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 RPS6P62753 249 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 PPFIA1Q13136 1202 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 BAATQ14032 418 aaPredicted RBP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 TMEM63BQ5T3F8 832 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 PAPD7Q5XG87 772 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 NOC3LQ8WTT2 800 aaKnown RBP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 DDX12PQ92771 950 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 LZTS2Q9BRK4 669 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 PAFAH1B1P43034 410 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 AARSP49588 968 aaKnown RBP eCLIP15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 CNPY4Q8N129 248 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 REPS2Q8NFH8 660 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 ALS2CR12Q96Q35 445 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 TAAR1Q96RJ0 339 aa15.64■□□□□ 0.09
SFSWAP-210ENST00000541286 TMEM88BA6NKF7 163 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 FAM155AB1AL88 458 aaPredicted RBP15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 NAIF1Q69YI7 327 aaPredicted RBP15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 TBC1D31Q96DN5 1066 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 AGTPBP1Q9UPW5 1226 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 NPHP3-ACAD11A0A0J9YXS1 232 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 CNMDO75829 334 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 STAT3P40763 770 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 USP8P40818 1118 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 POLR2FP61218 127 aaKnown RBP15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 GRB10Q13322 594 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 RAPGEF1Q13905 1077 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 CCDC170Q8IYT3 715 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 TRIM58Q8NG06 486 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 ODF2LQ9ULJ1 636 aa15.63■□□□□ 0.09
SFSWAP-210ENST00000541286 ABCB11O95342 1321 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 MCM3P25205 808 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 MEA1Q16626 185 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 IQCEQ6IPM2 695 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 RNPC3Q96LT9 517 aaKnown RBP15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 TTYH3Q9C0H2 523 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 ICAM1P05362 532 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 TUBBP07437 444 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 SH3D19Q5HYK7 790 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 SPATA4Q8NEY3 305 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 RBM46Q8TBY0 533 aaKnown RBP15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 CUL5Q93034 780 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 AK8Q96MA6 479 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 MOV10L1Q9BXT6 1211 aaKnown RBP15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 BCCIPQ9P287 314 aaKnown RBP eCLIP15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 SALL4Q9UJQ4 1053 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 SNX12Q9UMY4 172 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 MYH7BA7E2Y1 1941 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 ASTN1O14525 1302 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 MYCLP12524 364 aaPredicted RBP15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 NNTQ13423 1086 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 TRADDQ15628 312 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 OSBPL9Q96SU4 736 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 TSG101Q99816 390 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 ARHGAP39Q9C0H5 1083 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 BLOC1S4Q9NUP1 217 aa15.62■□□□□ 0.09
SFSWAP-210ENST00000541286 LAD1O00515 517 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 ZBED4O75132 1171 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 SP4Q02446 784 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 C8orf74Q6P047 294 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 RETREG2Q8NC44 543 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 C12orf42Q96LP6 360 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 GOLPH3Q9H4A6 298 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 E7EVH7 732 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 FAM86B1E9PN63 330 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 DDX39AO00148 427 aaKnown RBP15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 CXCL11O14625 94 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 FAM86B2P0C5J1 330 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 SPRED3Q2MJR0 410 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 GALNT17Q6IS24 598 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 FAM160B2Q86V87 743 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 LSM14BQ9BX40 385 aaKnown RBP15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 RIC8AQ9NPQ8 531 aa15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 A1CFQ9NQ94 594 aaKnown RBP15.61■□□□□ 0.09
SFSWAP-210ENST00000541286 E9PMD0 336 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 ELF1P32519 619 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 PEX19P40855 299 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 MAN2A1Q16706 1144 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 CREG2Q8IUH2 290 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 PNMA5Q96PV4 448 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 ANO3Q9BYT9 981 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 KLC4Q9NSK0 619 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 TLL2Q9Y6L7 1015 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 TRPM7Q96QT4 1865 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 MYL1P05976 194 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 PRPHP41219 470 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 EHHADHQ08426 723 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 NAA25Q14CX7 972 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 LBX2Q6XYB7 198 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 KLHL7Q8IXQ5 586 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 CCDC114Q96M63 670 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 TSGA10Q9BZW7 698 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 SPATC1LQ9H0A9 340 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 PLAGL2Q9UPG8 496 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 MCM3APO60318 1980 aa15.6■□□□□ 0.09
SFSWAP-210ENST00000541286 MYH10P35580 1976 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms