RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 XPNPEP1Q9NQW7 623 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 PDLIM7Q9NR12 457 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 SETD4Q9NVD3 440 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
DDX55-208ENST00000541259 MOXD2PA6NHM9 499 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 SFI1A8K8P3 1242 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 KLRC4O43908 158 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 HIP1RO75146 1068 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 MAFO75444 373 aaPredicted RBP10.37□□□□□ -0.75
DDX55-208ENST00000541259 KRT18P05783 430 aaKnown RBP10.37□□□□□ -0.75
DDX55-208ENST00000541259 KLRC1P26715 233 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 AMPD3Q01432 767 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 GRIK4Q16099 956 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 ZNF484Q5JVG2 852 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 ISM2Q6H9L7 571 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 DAW1Q8N136 415 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 VTI1AQ96AJ9 217 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 TMEM143Q96AN5 459 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 REEP2Q9BRK0 252 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 KATNAL1Q9BW62 490 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 GZF1Q9H116 711 aaPredicted RBP10.37□□□□□ -0.75
DDX55-208ENST00000541259 DHX33Q9H6R0 707 aaKnown RBP10.37□□□□□ -0.75
DDX55-208ENST00000541259 GPRC5CQ9NQ84 441 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 PHF24Q9UPV7 400 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 PCDHA5Q9Y5H7 936 aa10.37□□□□□ -0.75
DDX55-208ENST00000541259 IGKV6-21A0A0C4DH24 114 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 A0A1W2PQ45 241 aaPredicted RBP10.36□□□□□ -0.75
DDX55-208ENST00000541259 A0A1W2PQY0 241 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 RBAK-RBAKDNI3L0D1 243 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 DNM1LO00429 736 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 DGAT1O75907 488 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 C22orf31O95567 290 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 RPN1P04843 607 aaKnown RBP10.36□□□□□ -0.75
DDX55-208ENST00000541259 IDEP14735 1019 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 GUCY2CP25092 1073 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 GJA8P48165 433 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 SARSP49591 514 aaKnown RBP10.36□□□□□ -0.75
DDX55-208ENST00000541259 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
DDX55-208ENST00000541259 ASIC1P78348 528 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 ADAM17P78536 824 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 TBC1D8BQ0IIM8 1120 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 MAPK7Q13164 816 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 DRP2Q13474 957 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 EMC2Q15006 297 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 KMT5BQ4FZB7 885 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 FAM102BQ5T8I3 360 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 CNNM4Q6P4Q7 775 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 MTHFD1LQ6UB35 978 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 RBM43Q6ZSC3 357 aaKnown RBP10.36□□□□□ -0.75
DDX55-208ENST00000541259 LRRC71Q8N4P6 559 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 C7orf31Q8N865 590 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 SPATA20Q8TB22 786 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 DIS3LQ8TF46 1054 aaKnown RBP10.36□□□□□ -0.75
DDX55-208ENST00000541259 LMBR1Q8WVP7 490 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 HPS3Q969F9 1004 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 LRRC27Q9C0I9 530 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 KIAA1468Q9P260 1216 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 COL1A2P08123 1366 aa10.36□□□□□ -0.75
DDX55-208ENST00000541259 C17orf102A2RUQ5 167 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 RRN3P2A6NIE6 340 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 BIN1O00499 593 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 TREHO43280 583 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 CABYRO75952 493 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 HOXC8P31273 242 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 RFC5P40937 340 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 CLCN3P51790 818 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 ITGA7Q13683 1181 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 ZSCAN23Q3MJ62 389 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 FAM47CQ5HY64 1035 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 GDF6Q6KF10 455 aaPredicted RBP10.35□□□□□ -0.75
DDX55-208ENST00000541259 EFCAB12Q6NXP0 572 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 RUFY4Q6ZNE9 571 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 LINC01465Q8N7H1 131 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 ASAP3Q8TDY4 903 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 BSNDQ8WZ55 320 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 SMARCE1Q969G3 411 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 SYAP1Q96A49 352 aaPredicted RBP10.35□□□□□ -0.75
DDX55-208ENST00000541259 CCDC34Q96HJ3 373 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 GLT1D1Q96MS3 346 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 ZHX3Q9H4I2 956 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 SUGCTQ9HAC7 445 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 ATP6V0A4Q9HBG4 840 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 STARD7Q9NQZ5 370 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 PANK4Q9NVE7 773 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 KCND2Q9NZV8 630 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 TBC1D7Q9P0N9 293 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 GTF2IRD1Q9UHL9 959 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 HOOK1Q9UJC3 728 aaKnown RBP10.35□□□□□ -0.75
DDX55-208ENST00000541259 TUBE1Q9UJT0 475 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 MAN1B1Q9UKM7 699 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 SIP14410 1827 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 ALPK3Q96L96 1907 aa10.35□□□□□ -0.75
DDX55-208ENST00000541259 NRCAMQ92823 1304 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 PVALEFA0A1B0GWK0 134 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 SYCE3A1L190 88 aa10.34□□□□□ -0.75
DDX55-208ENST00000541259 FRMD3A2A2Y4 597 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms