RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 KBTBD4Q9NVX7 518 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 ANO10Q9NW15 660 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 HOOK1Q9UJC3 728 aaKnown RBP11.79□□□□□ -0.52
ATL3-204ENST00000540699 PPME1Q9Y570 386 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 PCDHA2Q9Y5H9 948 aa11.79□□□□□ -0.52
ATL3-204ENST00000540699 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
ATL3-204ENST00000540699 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
ATL3-204ENST00000540699 MED24O75448 989 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 C22orf31O95567 290 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 CAVIN2O95810 425 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 RPLP2P05387 115 aaKnown RBP11.78□□□□□ -0.52
ATL3-204ENST00000540699 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
ATL3-204ENST00000540699 DEKP35659 375 aaKnown RBP11.78□□□□□ -0.52
ATL3-204ENST00000540699 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 CTTNQ14247 550 aaKnown RBP11.78□□□□□ -0.52
ATL3-204ENST00000540699 ECM1Q16610 540 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 HAUS3Q68CZ6 603 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 TAF2Q6P1X5 1199 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 MTHFD1LQ6UB35 978 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 C11orf57Q6ZUT1 292 aaPredicted RBP11.78□□□□□ -0.52
ATL3-204ENST00000540699 CATSPER3Q86XQ3 398 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 ERMNQ8TAM6 284 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 FAM200AQ8TCP9 573 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 TRAPPC12Q8WVT3 735 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 CALML4Q96GE6 196 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 FAM161BQ96MY7 647 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 WNT8AQ9H1J5 351 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 DNAJC25Q9H1X3 360 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 KDM3AQ9Y4C1 1321 aa11.78□□□□□ -0.52
ATL3-204ENST00000540699 CHD9Q3L8U1 2897 aa11.77□□□□□ -0.52
ATL3-204ENST00000540699 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 SMIM35A0A1B0GVV1 85 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 MAGEB2O15479 319 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 MYL1P05976 194 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 RAG1P15918 1043 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 BMP6P22004 513 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 KLRC1P26715 233 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 CASP1P29466 404 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 YWHABP31946 246 aaKnown RBP11.77□□□□□ -0.53
ATL3-204ENST00000540699 AFMP43652 599 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 BFSP2Q13515 415 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 MORC3Q14149 939 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 DPCR1Q3MIW9 517 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 FAM26DQ5JW98 314 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 MFSD5Q6N075 450 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 RUFY4Q6ZNE9 571 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 KCNK18Q7Z418 384 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 TPH2Q8IWU9 490 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 KCTD17Q8N5Z5 321 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 TRIML1Q8N9V2 468 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 SMARCE1Q969G3 411 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 PLIN2Q99541 437 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 CBX8Q9HC52 389 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 ANKEF1Q9NU02 776 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
ATL3-204ENST00000540699 UMODL1Q5DID0 1318 aa11.77□□□□□ -0.53
ATL3-204ENST00000540699 MYH11P35749 1972 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 TMEM150BA6NC51 233 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 BIN1O00499 593 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 KLRC4O43908 158 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
ATL3-204ENST00000540699 SMC2O95347 1197 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 CKBP12277 381 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 SELPP16109 830 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 CYP2C18P33260 490 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 IGBP1P78318 339 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 CUL4BQ13620 913 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 IQCB1Q15051 598 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 UVSSAQ2YD98 709 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 OTUD6AQ7L8S5 288 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 RAD54LQ92698 747 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 STAMQ92783 540 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 VWCEQ96DN2 955 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 GSDMAQ96QA5 445 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 NACC1Q96RE7 527 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 C7orf25Q9BPX7 421 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 BPIFA3Q9BQP9 254 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 CYP26B1Q9NR63 512 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 DBR1Q9UK59 544 aaKnown RBP11.76□□□□□ -0.53
ATL3-204ENST00000540699 MICAL3Q7RTP6 2002 aa11.76□□□□□ -0.53
ATL3-204ENST00000540699 ZBTB39O15060 712 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 PARNO95453 639 aaKnown RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 RFC2P35250 354 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 RFC5P40937 340 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 RARRES1P49788 294 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 ZNF165P49910 485 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 EPHB4P54760 987 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms